RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 TMEM2Q9UHN6 1383 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 A0A0D9SFI3 127 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 GCKRQ14397 625 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 GOLGA1Q92805 767 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF622Q969S3 477 aaKnown RBP eCLIP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 EXOC1Q9NV70 894 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 RNF17Q9BXT8 1623 aaKnown RBP9.5□□□□□ -0.89
ALMS1-208ENST00000620466 OTUD7BQ6GQQ9 843 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 CCDC113Q9H0I3 377 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 VAT1LQ9HCJ6 419 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 JADE2Q9NQC1 790 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 MTMR6Q9Y217 621 aa9.5□□□□□ -0.89
ALMS1-208ENST00000620466 EYA2O00167 538 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 UBA7P41226 1012 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 STX17P56962 302 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 MYL5Q02045 173 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 MIGA1Q8NAN2 632 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 ZKSCAN3Q9BRR0 538 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CTAGE15A4D2H0 777 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CTAGE8P0CG41 777 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 PAFAH1B1P43034 410 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CTAGE6Q86UF2 777 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CTAGE4Q8IX94 777 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
ALMS1-208ENST00000620466 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 ARFGAP3Q9NP61 516 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 MLH3Q9UHC1 1453 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 PCDH11XQ9BZA7 1347 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 GNAT2P19087 354 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CEP112Q8N8E3 955 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 EDC3Q96F86 508 aaKnown RBP9.49□□□□□ -0.89
ALMS1-208ENST00000620466 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 TRIM75PA6NK02 468 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 U2AF2P26368 475 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■□□□□ 10.6
ALMS1-208ENST00000620466 KBTBD3Q8NAB2 608 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 FEZ1Q99689 392 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 IGSF3O75054 1194 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 NLRP12P59046 1061 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 NAA16Q6N069 864 aaPredicted RBP9.49□□□□□ -0.89
ALMS1-208ENST00000620466 DYDC1Q8WWB3 177 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 SMARCC1Q92922 1105 aaPredicted RBP9.49□□□□□ -0.89
ALMS1-208ENST00000620466 ERO1AQ96HE7 468 aa9.49□□□□□ -0.89
ALMS1-208ENST00000620466 CTAGE9A4FU28 777 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 B4E1Z4 1266 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 IL2RBP14784 551 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 EHBP1Q8NDI1 1231 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 RNF216Q9NWF9 866 aaPredicted RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 RFC4P35249 363 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 MAP2K1Q02750 393 aaPredicted RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 CCDC40Q4G0X9 1142 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 CEP152O94986 1710 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 MPHOSPH6Q99547 160 aaKnown RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 ATP5JP18859 108 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 VPS36Q86VN1 386 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 ZFP91Q96JP5 570 aaPredicted RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 TIGD1Q96MW7 591 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 BAG1Q99933 345 aaPredicted RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 E7EWF7 191 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 NR1I2O75469 434 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 FANCCQ00597 558 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 HEATR3Q7Z4Q2 680 aa9.48□□□□□ -0.89
ALMS1-208ENST00000620466 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
ALMS1-208ENST00000620466 MBD4O95243 580 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 CKAP4Q07065 602 aaKnown RBP9.47□□□□□ -0.89
ALMS1-208ENST00000620466 CABP5Q9NP86 173 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 TSPY3P0CV98 308 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 TSPY8P0CW00 308 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 IDEP14735 1019 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 MYO1BO43795 1136 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 SPAG1Q07617 926 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF569Q5MCW4 686 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 SPTY2D1Q68D10 685 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-208ENST00000620466 ADCK5Q3MIX3 580 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 HLA-DOAP06340 250 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 MCM7P33993 719 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 TSC1Q92574 1164 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 EAF2Q96CJ1 260 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-208ENST00000620466 FAM89AQ96GI7 184 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 SAMM50Q9Y512 469 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
ALMS1-208ENST00000620466 ZNF202O95125 648 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CALM1P0DP23 149 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CALM2P0DP24 149 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CALM3P0DP25 149 aa9.46□□□□□ -0.89
ALMS1-208ENST00000620466 CYLC1P35663 651 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-208ENST00000620466 ATP6V1AP38606 617 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms