RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SLC9C2Q5TAH2 1124 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 ZSCAN25Q6NSZ9 544 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 ARHGAP27Q6ZUM4 889 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 ERICH6Q7L0X2 663 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
CPNE3-209ENST00000620393 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 TBC1D22AQ8WUA7 517 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 RUFY2Q8WXA3 655 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 ESYT1Q9BSJ8 1104 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 KIF13BQ9NQT8 1826 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 DIAPH3Q9NSV4 1193 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 ABCF2Q9UG63 623 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
CPNE3-209ENST00000620393 RFX7Q2KHR2 1363 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 SEC24BO95487 1268 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 PYGBP11216 843 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 PDE6AP16499 860 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 ADD2P35612 726 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 FKBP1AP62942 108 aaKnown RBP9.68□□□□□ -0.86
CPNE3-209ENST00000620393 NMIQ13287 307 aaPredicted RBP9.68□□□□□ -0.86
CPNE3-209ENST00000620393 MCMDC2Q4G0Z9 681 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 STRIP1Q5VSL9 837 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 TMED8Q6PL24 325 aaPredicted RBP9.68□□□□□ -0.86
CPNE3-209ENST00000620393 CWC27Q6UX04 472 aaKnown RBP9.68□□□□□ -0.86
CPNE3-209ENST00000620393 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 FAM227BQ96M60 508 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 HELLSQ9NRZ9 838 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 RAI14Q9P0K7 980 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 METRNQ9UJH8 293 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 ZNRF3Q9ULT6 936 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 JAG2Q9Y219 1238 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 SUGT1Q9Y2Z0 365 aa9.68□□□□□ -0.86
CPNE3-209ENST00000620393 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 YDJCA8MPS7 323 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 SGSM2O43147 1006 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 CHGBP05060 677 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
CPNE3-209ENST00000620393 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 MFSD14BQ5SR56 506 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 NIM1KQ8IY84 436 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 MAGEB6Q8N7X4 407 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 JDP2Q8WYK2 163 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 APPBP2Q92624 585 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 NSUN4Q96CB9 384 aaKnown RBP9.67□□□□□ -0.86
CPNE3-209ENST00000620393 DUOX1Q9NRD9 1551 aa9.67□□□□□ -0.86
CPNE3-209ENST00000620393 ZNF532Q9HCE3 1301 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 LRRC37AA6NMS7 1700 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 A0A0D9SFI3 127 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 YBX3P16989 372 aaKnown RBP eCLIP9.66□□□□□ -0.865e-6■■■■□ 19.4
CPNE3-209ENST00000620393 CYP7A1P22680 504 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 PRDX5P30044 214 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 PRELPP51888 382 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 MECOMQ03112 1051 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 GRIK5Q16478 980 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 DACT2Q5SW24 774 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 OSBP2Q969R2 916 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 SEC62Q99442 399 aaKnown RBP9.66□□□□□ -0.86
CPNE3-209ENST00000620393 MRIQ9BWK5 157 aa9.66□□□□□ -0.86
CPNE3-209ENST00000620393 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
CPNE3-209ENST00000620393 KIAA1551Q9HCM1 1747 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 RAD50Q92878 1312 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 TTLL13PA6NNM8 815 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 EPB41L2O43491 1005 aaKnown RBP9.65□□□□□ -0.86
CPNE3-209ENST00000620393 GRIN3BO60391 1043 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 REC8O95072 547 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 LDHCP07864 332 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
CPNE3-209ENST00000620393 LMNB1P20700 586 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 GSTO1P78417 241 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 RASSF7Q02833 373 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 CXCL9Q07325 125 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 GPR162Q16538 588 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 NAA16Q6N069 864 aaPredicted RBP9.65□□□□□ -0.86
CPNE3-209ENST00000620393 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 CERS5Q8N5B7 392 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 ZNF384Q8TF68 577 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 FAM163AQ96GL9 167 aaPredicted RBP9.65□□□□□ -0.86
CPNE3-209ENST00000620393 MXD3Q9BW11 206 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 USP26Q9BXU7 913 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
CPNE3-209ENST00000620393 IL25Q9H293 177 aa9.65□□□□□ -0.86
CPNE3-209ENST00000620393 LTBP1Q14766 1721 aa9.65□□□□□ -0.87
CPNE3-209ENST00000620393 SPEF2Q9C093 1822 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 M0R2C6 588 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 FZD9O00144 591 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 RAD17O75943 681 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 MFAP1P55081 439 aaKnown RBP9.64□□□□□ -0.87
CPNE3-209ENST00000620393 PPP4CP60510 307 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 TNIP1Q15025 636 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
CPNE3-209ENST00000620393 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms