RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 SH3BP5LQ7L8J4 393 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 CNTROBQ8N137 903 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 GPC2Q8N158 579 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 HHIPL1Q96JK4 782 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 TEX13AQ9BXU3 409 aaPredicted RBP9.84□□□□□ -0.83
SENP3-210ENST00000619785 BIN2Q9UBW5 565 aaPredicted RBP9.84□□□□□ -0.83
SENP3-210ENST00000619785 CEMIPQ8WUJ3 1361 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 COL3A1P02461 1466 aaPredicted RBP9.84□□□□□ -0.83
SENP3-210ENST00000619785 AKAP11Q9UKA4 1901 aa9.84□□□□□ -0.83
SENP3-210ENST00000619785 POTEB3A0JP26 581 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 SOWAHDA6NJG2 315 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 STARD3NLO95772 234 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 MAP2K2P36507 400 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 SERPINB4P48594 390 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 GTF2IP78347 998 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 CCDC93Q567U6 631 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 POTEBQ6S5H4 581 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 CLEC4GQ6UXB4 293 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
SENP3-210ENST00000619785 FAM163AQ96GL9 167 aaPredicted RBP9.83□□□□□ -0.84
SENP3-210ENST00000619785 PSMD1Q99460 953 aa9.83□□□□□ -0.84
SENP3-210ENST00000619785 DDX21Q9NR30 783 aaKnown RBP eCLIP9.83□□□□□ -0.84
SENP3-210ENST00000619785 CA12O43570 354 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 TLL1O43897 1013 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 SEC13P55735 322 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 TSGA10IPQ3SY00 556 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 LHX8Q68G74 356 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 BPHLQ86WA6 291 aaPredicted RBP9.82□□□□□ -0.84
SENP3-210ENST00000619785 CNBD1Q8NA66 436 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 ANKRD36CQ5JPF3 1778 aa9.82□□□□□ -0.84
SENP3-210ENST00000619785 POLR2AP24928 1970 aaKnown RBP9.82□□□□□ -0.84
SENP3-210ENST00000619785 PRMT3O60678 531 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 NPR1P16066 1061 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 ECE1P42892 770 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 CRY2Q49AN0 593 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 ZNF790Q6PG37 636 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 RTKN2Q8IZC4 609 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 SIX5Q8N196 739 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 SLC10A4Q96EP9 437 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
SENP3-210ENST00000619785 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
SENP3-210ENST00000619785 TLL2Q9Y6L7 1015 aa9.81□□□□□ -0.84
SENP3-210ENST00000619785 CANXP27824 592 aaKnown RBP9.8□□□□□ -0.84
SENP3-210ENST00000619785 IARSP41252 1262 aaKnown RBP9.8□□□□□ -0.84
SENP3-210ENST00000619785 ST5P78524 1137 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 MTHFSDQ2M296 383 aaKnown RBP9.8□□□□□ -0.84
SENP3-210ENST00000619785 CST9Q5W186 159 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 MAP1SQ66K74 1059 aaPredicted RBP9.8□□□□□ -0.84
SENP3-210ENST00000619785 CCDC102BQ68D86 513 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
SENP3-210ENST00000619785 CAPNS2Q96L46 248 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 LAMB2P55268 1798 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 RNF123Q5XPI4 1314 aa9.8□□□□□ -0.84
SENP3-210ENST00000619785 IBTKQ9P2D0 1353 aaPredicted RBP9.79□□□□□ -0.84
SENP3-210ENST00000619785 KDM3BQ7LBC6 1761 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
SENP3-210ENST00000619785 TNNT2P45379 298 aaPredicted RBP9.79□□□□□ -0.84
SENP3-210ENST00000619785 SCNN1DP51172 638 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 MARSP56192 900 aaKnown RBP9.79□□□□□ -0.84
SENP3-210ENST00000619785 NBPF20Q3BBV1 942 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 BICDL1Q6ZP65 573 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 NYAP1Q6ZVC0 841 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 C1orf216Q8TAB5 229 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 SLC6A16Q9GZN6 736 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 PGAP2Q9UHJ9 254 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 LRRC37AA6NMS7 1700 aa9.79□□□□□ -0.84
SENP3-210ENST00000619785 LAMB1P07942 1786 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 ABL1P00519 1130 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 USP4Q13107 963 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 THSD4Q6ZMP0 1018 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 USP50Q70EL3 339 aaPredicted RBP9.78□□□□□ -0.84
SENP3-210ENST00000619785 SH3RF1Q7Z6J0 888 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 SAPCD2Q86UD0 394 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 TPCN2Q8NHX9 752 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 BAP1Q92560 729 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 GPR101Q96P66 508 aaPredicted RBP9.78□□□□□ -0.84
SENP3-210ENST00000619785 MCOLN1Q9GZU1 580 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SENP3-210ENST00000619785 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
SENP3-210ENST00000619785 HOXA10P31260 410 aaPredicted RBP9.77□□□□□ -0.85
SENP3-210ENST00000619785 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
SENP3-210ENST00000619785 EAPPQ56P03 285 aaPredicted RBP9.77□□□□□ -0.85
SENP3-210ENST00000619785 PANK3Q9H999 370 aa9.77□□□□□ -0.85
SENP3-210ENST00000619785 ZNF277Q9NRM2 450 aaPredicted RBP9.77□□□□□ -0.85
SENP3-210ENST00000619785 RBBP6Q7Z6E9 1792 aaKnown RBP9.77□□□□□ -0.85
SENP3-210ENST00000619785 CDHR2Q9BYE9 1310 aa9.77□□□□□ -0.85
SENP3-210ENST00000619785 PSME4Q14997 1843 aa9.77□□□□□ -0.85
SENP3-210ENST00000619785 DDX60Q8IY21 1712 aaKnown RBP9.76□□□□□ -0.85
SENP3-210ENST00000619785 DLG5Q8TDM6 1919 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 CCDC85CA6NKD9 419 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 ALDH1B1P30837 517 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 CYP4F22Q6NT55 531 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 DNAJC14Q6Y2X3 702 aaPredicted RBP9.76□□□□□ -0.85
SENP3-210ENST00000619785 MORC1Q86VD1 984 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
SENP3-210ENST00000619785 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms