RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 PDE8AO60658 829 aa22.86■■□□□ 1.25
FGFR1-241ENST00000619564 SKILP12757 684 aa22.86■■□□□ 1.25
FGFR1-241ENST00000619564 MRPS9P82933 396 aaKnown RBP22.85■■□□□ 1.25
FGFR1-241ENST00000619564 IQUBQ8NA54 791 aa22.85■■□□□ 1.25
FGFR1-241ENST00000619564 RXRAP19793 462 aa22.85■■□□□ 1.25
FGFR1-241ENST00000619564 ARHGEF10LQ9HCE6 1279 aa22.85■■□□□ 1.25
FGFR1-241ENST00000619564 A0A1B0GUL7 405 aa22.85■■□□□ 1.25
FGFR1-241ENST00000619564 FAM107BQ9H098 131 aa22.85■■□□□ 1.25
FGFR1-241ENST00000619564 CCDC77Q9BR77 488 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 ZKSCAN3Q9BRR0 538 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 BIN2Q9UBW5 565 aaPredicted RBP22.84■■□□□ 1.25
FGFR1-241ENST00000619564 CBX1P83916 185 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 TAF12Q16514 161 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 CCDC42Q96M95 316 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 ATP2A1O14983 1001 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 CHMLP26374 656 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 OTUD6BQ8N6M0 293 aa22.84■■□□□ 1.25
FGFR1-241ENST00000619564 RPL13P26373 211 aaKnown RBP22.83■■□□□ 1.25
FGFR1-241ENST00000619564 KIF5AQ12840 1032 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 GSTA5Q7RTV2 222 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 SBNO1A3KN83 1393 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 CEP63Q96MT8 703 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 SYT1P21579 422 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 AKNAD1Q5T1N1 836 aa22.83■■□□□ 1.25
FGFR1-241ENST00000619564 UBXN1Q04323 297 aa22.83■■□□□ 1.24
FGFR1-241ENST00000619564 PIK3C2GO75747 1445 aa22.83■■□□□ 1.24
FGFR1-241ENST00000619564 KRT86O43790 486 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 GPCPD1Q9NPB8 672 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 TMEM110-MUSTN1A8MSY1 372 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 CERS3Q8IU89 383 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 CCDC65Q8IXS2 484 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 ZBTB40Q9NUA8 1239 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.82■■□□□ 1.24
FGFR1-241ENST00000619564 UHRF1BP1Q6BDS2 1440 aa22.82■■□□□ 1.24
FGFR1-241ENST00000619564 HOXB7P09629 217 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 LETM2Q2VYF4 491 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 C6orf163Q5TEZ5 329 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 CCDC50Q8IVM0 306 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 PLCB3Q01970 1234 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 SV2BQ7L1I2 683 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 PLEKHM2Q8IWE5 1019 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 RNF216Q9NWF9 866 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-241ENST00000619564 ARL1P40616 181 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-241ENST00000619564 TNNI3KQ59H18 835 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 CCDC186Q7Z3E2 898 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 FPGT-TNNI3KV9GXZ4 949 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 STX17P56962 302 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 BMS1Q14692 1282 aaKnown RBP22.81■■□□□ 1.24
FGFR1-241ENST00000619564 WDR66Q8TBY9 1149 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 TMEM87BQ96K49 555 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 PLIN2Q99541 437 aa22.81■■□□□ 1.24
FGFR1-241ENST00000619564 H0YIN7 160 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 FMNL3Q8IVF7 1028 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 DNAI1Q9UI46 699 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
FGFR1-241ENST00000619564 TIMM10P62072 90 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 HOOK2Q96ED9 719 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 PKD2L1Q9P0L9 805 aa22.8■■□□□ 1.24
FGFR1-241ENST00000619564 DPP8Q6V1X1 898 aaPredicted RBP22.8■■□□□ 1.24
FGFR1-241ENST00000619564 BRDTQ58F21 947 aaPredicted RBP22.79■■□□□ 1.24
FGFR1-241ENST00000619564 CARD14Q9BXL6 1004 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 TNNQ9UQP3 1299 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 ARMT1Q9H993 441 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 PLCD1P51178 756 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 XAGE2Q96GT9 111 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 FRMD4BQ9Y2L6 1034 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 TYRO3Q06418 890 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 ATL3Q6DD88 541 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 SUPT20HQ8NEM7 779 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
FGFR1-241ENST00000619564 B4E1Z4 1266 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 CTAGE9A4FU28 777 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 LARGE2Q8N3Y3 721 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 GLT8D2Q9H1C3 349 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 VWA3AA6NCI4 1184 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 DEXIO95424 95 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 INTS4Q96HW7 963 aaKnown RBP22.78■■□□□ 1.24
FGFR1-241ENST00000619564 PRIMPOLQ96LW4 560 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 TESK2Q96S53 571 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 PPP1R2P41236 205 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 ZNF174Q15697 407 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 FCHSD1Q86WN1 690 aa22.78■■□□□ 1.24
FGFR1-241ENST00000619564 RLBP1P12271 317 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 NOD1Q9Y239 953 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 CCT6AP40227 531 aaKnown RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 GIMAP7Q8NHV1 300 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 EDC4Q6P2E9 1401 aaKnown RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 TUBB4AP04350 444 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 CCDC117Q8IWD4 279 aaPredicted RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 FNBP1Q96RU3 617 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 ATP6V0A2Q9Y487 856 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 FAM98CQ17RN3 349 aaKnown RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 DCAF17Q5H9S7 520 aaPredicted RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 ORAI2Q96SN7 254 aa22.77■■□□□ 1.24
FGFR1-241ENST00000619564 STMN4Q9H169 189 aaPredicted RBP22.77■■□□□ 1.24
FGFR1-241ENST00000619564 SMTNP53814 917 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms