RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 BMP15O95972 392 aa16.79■□□□□ 0.28
COL5A1-208ENST00000618395 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
COL5A1-208ENST00000618395 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-208ENST00000618395 MMRN2Q9H8L6 949 aa16.79■□□□□ 0.28
COL5A1-208ENST00000618395 CEP70Q8NHQ1 597 aa16.79■□□□□ 0.28
COL5A1-208ENST00000618395 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
COL5A1-208ENST00000618395 NEK2P51955 445 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 TRIM60Q495X7 471 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 HOMER3Q9NSC5 361 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 RGS16O15492 202 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-208ENST00000618395 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
COL5A1-208ENST00000618395 KRT10P13645 584 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 ITIH3Q06033 890 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 USP37Q86T82 979 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 EPS15L1Q9UBC2 864 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 SEPT2Q15019 361 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 SDCCAG3Q96C92 435 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 MINK1Q8N4C8 1332 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-208ENST00000618395 NOP14P78316 857 aaKnown RBP16.78■□□□□ 0.28
COL5A1-208ENST00000618395 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
COL5A1-208ENST00000618395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL5A1-208ENST00000618395 STX2P32856 288 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.28
COL5A1-208ENST00000618395 DEUP1Q05D60 604 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 NLRP7Q8WX94 980 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 DYTNA2CJ06 578 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 CFAP61Q8NHU2 1237 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 AFMP43652 599 aa16.77■□□□□ 0.28
COL5A1-208ENST00000618395 MAP3K7O43318 606 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 SUN1O94901 812 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 ZNF445P59923 1031 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 F13A1P00488 732 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 GUCY2CP25092 1073 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 CCDC89Q8N998 374 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 DAAM1Q9Y4D1 1078 aa16.77■□□□□ 0.27
COL5A1-208ENST00000618395 LRPPRCP42704 1394 aaKnown RBP16.77■□□□□ 0.27
COL5A1-208ENST00000618395 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 RBSNQ9H1K0 784 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ATP1A2P50993 1020 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ANKRD20A4Q4UJ75 823 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ANKRD20A8PQ5CZ79 823 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ANKRD20A2Q5SQ80 823 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ANKRD20A1Q5TYW2 823 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 SCHIP1Q9P0W5 487 aaPredicted RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 KRT75O95678 551 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 GIMAP4Q9NUV9 329 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 CCDC93Q567U6 631 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 KIAA2013Q8IYS2 634 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ENAHQ8N8S7 591 aaPredicted RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 NME8Q8N427 588 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 TTC16Q8NEE8 873 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 MGARPQ8TDB4 240 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ACTR5Q9H9F9 607 aaPredicted RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 CATIPQ7Z7H3 387 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
COL5A1-208ENST00000618395 GFM2Q969S9 779 aaKnown RBP16.76■□□□□ 0.27
COL5A1-208ENST00000618395 ATP8B1O43520 1251 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 PSMD2Q13200 908 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 UBL4BQ8N7F7 174 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 PPP4R1Q8TF05 950 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 EXOC4Q96A65 974 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-208ENST00000618395 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 ZNF280CQ8ND82 737 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 KCNA4P22459 653 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 CHUKO15111 745 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 MAP7D3Q8IWC1 876 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
COL5A1-208ENST00000618395 RAB17Q9H0T7 212 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 ZNF213O14771 459 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 GIPC1O14908 333 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 FAM204AQ9H8W3 233 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 ARHGAP6O43182 974 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 C17orf53Q8N3J3 647 aaPredicted RBP16.75■□□□□ 0.27
COL5A1-208ENST00000618395 CCDC197Q8NCU1 140 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 NAPBQ9H115 298 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 TSC22D4Q9Y3Q8 395 aa16.75■□□□□ 0.27
COL5A1-208ENST00000618395 POLD1P28340 1107 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 NOX5Q96PH1 765 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 SND1Q7KZF4 910 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL5A1-208ENST00000618395 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
COL5A1-208ENST00000618395 MAK16Q9BXY0 300 aaKnown RBP16.74■□□□□ 0.27
COL5A1-208ENST00000618395 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 CTNNA1P35221 906 aaKnown RBP16.74■□□□□ 0.27
COL5A1-208ENST00000618395 LGSNQ5TDP6 509 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 NPHP3Q7Z494 1330 aa16.74■□□□□ 0.27
COL5A1-208ENST00000618395 PPM1FP49593 454 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms