RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SRRTQ9BXP5 876 aaKnown RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 BIN1O00499 593 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
TCF4-248ENST00000616053 ESR2Q92731 530 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 SLC4A4Q9Y6R1 1079 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 KRT3P12035 628 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 KRT10P13645 584 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 DCAF17Q5H9S7 520 aaPredicted RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 GPR161Q8N6U8 529 aaKnown RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 WDR66Q8TBY9 1149 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 CHMP2AO43633 222 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 RAB11FIP3O75154 756 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 VCX3BQ9H321 246 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 PYGLP06737 847 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 CYLC1P35663 651 aaPredicted RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 RNASELQ05823 741 aaKnown RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 SRPK1Q96SB4 655 aaKnown RBP14.16□□□□□ -0.14
TCF4-248ENST00000616053 MCM7P33993 719 aa14.16□□□□□ -0.14
TCF4-248ENST00000616053 S100BP04271 92 aaPredicted RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 P4HA1P13674 534 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 ADRA2BP18089 450 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 LIN9Q5TKA1 542 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 UBN1Q9NPG3 1134 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 BICDL2A1A5D9 508 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 SEL1L2Q5TEA6 688 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 ISM2Q6H9L7 571 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 TSR2Q969E8 191 aaKnown RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 HEXIM1O94992 359 aaKnown RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 GADL1Q6ZQY3 521 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 IFT81Q8WYA0 676 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 AFMP43652 599 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 MTRF1LQ9UGC7 380 aaKnown RBP14.15□□□□□ -0.14
TCF4-248ENST00000616053 POLIQ9UNA4 740 aa14.15□□□□□ -0.14
TCF4-248ENST00000616053 PABPC4Q13310 644 aaKnown RBP eCLIP14.15□□□□□ -0.151e-10■■■■■ 52.4
TCF4-248ENST00000616053 BSPRYQ5W0U4 402 aa14.15□□□□□ -0.15
TCF4-248ENST00000616053 GLG1Q92896 1179 aa14.15□□□□□ -0.15
TCF4-248ENST00000616053 GSTA1P08263 222 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 GSTA2P09210 222 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 RPS6KC1Q96S38 1066 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 MSH6P52701 1360 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 TRAPPC3LQ5T215 181 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 KRT28Q7Z3Y7 464 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 NCOA7Q8NI08 942 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 FCHSD1Q86WN1 690 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 GPATCH11Q8N954 259 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 ANAPC5Q9UJX4 755 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 ZEB2O60315 1214 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 NR1H4Q96RI1 486 aaPredicted RBP14.14□□□□□ -0.15
TCF4-248ENST00000616053 IFNLR1Q8IU57 520 aaPredicted RBP14.14□□□□□ -0.15
TCF4-248ENST00000616053 CCDC87Q9NVE4 849 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
TCF4-248ENST00000616053 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
TCF4-248ENST00000616053 RAPGEF1Q13905 1077 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 C16orf72Q14CZ0 275 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 SULF1Q8IWU6 871 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 ABCF3Q9NUQ8 709 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 EXOC7Q9UPT5 735 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 MAFGO15525 162 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 TMCO5AQ8N6Q1 288 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 PSMA7O14818 248 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 CPXCR1Q8N123 301 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 SCAND2PQ9GZW5 306 aaPredicted RBP14.13□□□□□ -0.15
TCF4-248ENST00000616053 MCM9Q9NXL9 1143 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 EXOC6BQ9Y2D4 811 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 PTGS1P23219 599 aa14.13□□□□□ -0.15
TCF4-248ENST00000616053 K7ELQ4 463 aaPredicted RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 CD19P15391 556 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 SESTD1Q86VW0 696 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 VCXQ9H320 206 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 RNF8O76064 485 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 LDHBP07195 334 aaKnown RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 ELF1P32519 619 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 GKAP1Q5VSY0 366 aaPredicted RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 BLVRAP53004 296 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 ANGPTL3Q9Y5C1 460 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 MMTAG2Q9BU76 263 aaKnown RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 RPL13P26373 211 aaKnown RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 KHDRBS2Q5VWX1 349 aaKnown RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 TMC6Q7Z403 805 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 NEK11Q8NG66 645 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 LIMCH1Q9UPQ0 1083 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
TCF4-248ENST00000616053 SMIM24O75264 130 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 CCDC102BQ68D86 513 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms