RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 KIF5BP33176 963 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 RPS8P62241 208 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 LONRF3Q496Y0 759 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 MFSD14BQ5SR56 506 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 DPP8Q6V1X1 898 aaPredicted RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 TAX1BP1Q86VP1 789 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 LARGE2Q8N3Y3 721 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 KBTBD3Q8NAB2 608 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 SPATA5Q8NB90 893 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 JDP2Q8WYK2 163 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 TRIM47Q96LD4 638 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 DBNDD1Q9H9R9 158 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 HMG20BQ9P0W2 317 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ZMYM4Q5VZL5 1548 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 ZCCHC11Q5TAX3 1644 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 CLRN2A0PK11 232 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 N4BP3O15049 544 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 MYCP01106 439 aaPredicted RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 DIXDC1Q155Q3 683 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 STAT6P42226 847 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CTSWP56202 376 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 DYNLL1P63167 89 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 ASIC1P78348 528 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 KIF4BQ2VIQ3 1234 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CCDC40Q4G0X9 1142 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 SYCP3Q8IZU3 236 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 RGS22Q8NE09 1264 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 FRMPD2Q68DX3 1309 aaPredicted RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 TTC41PQ6P2S7 1318 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 ZFYP08048 801 aaPredicted RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 PTPN14Q15678 1187 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 ZNF827Q17R98 1081 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 HSP90B2PQ58FF3 399 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TRMT44Q8IYL2 757 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 LRRC47Q8N1G4 583 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 TSC1Q92574 1164 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 MAP1BP46821 2468 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 PTPROQ16827 1216 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CUL5Q93034 780 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 RBSNQ9H1K0 784 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CPVLQ9H3G5 476 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TPCN1Q9ULQ1 816 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 FAM196BA6NMK8 535 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 POLR3GO15318 223 aaPredicted RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 FGAP02671 866 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 CDC25AP30304 524 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 UBASH3AP57075 661 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TFAP4Q01664 338 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 KARSQ15046 597 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 ERFEQ4G0M1 354 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 GPKOWQ92917 476 aaPredicted RBP eCLIP4.35□□□□□ -1.713e-6■■■■■ 32.9
LTN1-207ENST00000614971 AIFM3Q96NN9 605 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 KRT23Q9C075 422 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TTF2Q9UNY4 1162 aaKnown RBP4.35□□□□□ -1.71
LTN1-207ENST00000614971 GCC2Q8IWJ2 1684 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TCP10L2B9ZVM9 353 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 E7EWF7 191 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 TYRO3Q06418 890 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 HINFPQ9BQA5 517 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 GGA1Q9UJY5 639 aa4.35□□□□□ -1.71
LTN1-207ENST00000614971 ABCC4O15439 1325 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 TXKP42681 527 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 NOP2P46087 812 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 CHRNDQ07001 517 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 TMEM266Q2M3C6 531 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 RASGRP4Q8TDF6 673 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 MRPS27Q92552 414 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 APPBP2Q92624 585 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 BCORL1Q5H9F3 1711 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 POLR2DO15514 142 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 TRIM21P19474 475 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 CTNNBL1Q8WYA6 563 aaPredicted RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 NYXQ9GZU5 481 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 BLZF1Q9H2G9 400 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 USP6P35125 1406 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 GJC1P36383 396 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 UBXN2AP68543 259 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 DYMQ7RTS9 669 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 DIS3L2Q8IYB7 885 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 SMARCC2Q8TAQ2 1214 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 SSH3Q8TE77 659 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 CCDC102AQ96A19 550 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 TCHPQ9BT92 498 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 CCDC113Q9H0I3 377 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 LZTFL1Q9NQ48 299 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 IFNKQ9P0W0 207 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 DACH1Q9UI36 760 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 EFCAB6Q5THR3 1501 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 INSRP06213 1382 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 URB1O60287 2271 aaKnown RBP4.34□□□□□ -1.71
LTN1-207ENST00000614971 PPIP5K2O43314 1243 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 RAD17O75943 681 aa4.34□□□□□ -1.71
LTN1-207ENST00000614971 LARGE1O95461 756 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms