RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PTPN14Q15678 1187 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 MRFAP1L1Q96HT8 127 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 ZNF594Q96JF6 807 aaPredicted RBP25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 BRIP1Q9BX63 1249 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 NRBP1Q9UHY1 535 aa25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 PA2G4Q9UQ80 394 aaKnown RBP25.62■■□□□ 1.69
POLR2J3-220ENST00000613744 CNTROBQ8N137 903 aa25.61■■□□□ 1.69
POLR2J3-220ENST00000613744 ANKRD31Q8N7Z5 1873 aa25.61■■□□□ 1.69
POLR2J3-220ENST00000613744 LAMB2P55268 1798 aa25.61■■□□□ 1.69
POLR2J3-220ENST00000613744 ITGA6P23229 1130 aa25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 BMS1Q14692 1282 aaKnown RBP25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 CCDC152Q4G0S7 254 aa25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 LRRC8AQ8IWT6 810 aa25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 SLU7O95391 586 aaKnown RBP25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 NAA30Q147X3 362 aaPredicted RBP25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 CCDC83Q8IWF9 413 aa25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 RASEFQ8IZ41 740 aa25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 ZNF215Q9UL58 517 aaPredicted RBP25.6■■□□□ 1.69
POLR2J3-220ENST00000613744 LIG1P18858 919 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 CCDC57Q2TAC2 916 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 ZSWIM6Q9HCJ5 1215 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 PDRG1Q9NUG6 133 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 TAF1P21675 1872 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 CHRNA5P30532 468 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 SF3B3Q15393 1217 aaKnown RBP25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 TPRNQ4KMQ1 711 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 SIL1Q9H173 461 aa25.59■■□□□ 1.69
POLR2J3-220ENST00000613744 TUBB4AP04350 444 aa25.58■■□□□ 1.69
POLR2J3-220ENST00000613744 ZNF165P49910 485 aa25.58■■□□□ 1.69
POLR2J3-220ENST00000613744 IFIT5Q13325 482 aaKnown RBP25.58■■□□□ 1.69
POLR2J3-220ENST00000613744 FBXO38Q6PIJ6 1188 aa25.58■■□□□ 1.69
POLR2J3-220ENST00000613744 VPS37CA5D8V6 355 aaPredicted RBP25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 CASTP20810 708 aaKnown RBP25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 CYP2C19P33261 490 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 OS9Q13438 667 aaPredicted RBP25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 PI4K2BQ8TCG2 481 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 RUFY2Q8WXA3 655 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 CYP46A1Q9Y6A2 500 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 COL4A1P02462 1669 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 LARGE1O95461 756 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 PDE6BP35913 854 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 RFX5P48382 616 aaPredicted RBP25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 RPGRQ92834 1020 aaKnown RBP25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 DACT1Q9NYF0 836 aa25.57■■□□□ 1.68
POLR2J3-220ENST00000613744 GOLGA6L4A6NEF3 574 aa25.56■■□□□ 1.68
POLR2J3-220ENST00000613744 ANKRD18BA2A2Z9 1011 aa25.56■■□□□ 1.68
POLR2J3-220ENST00000613744 TAF7LQ5H9L4 462 aa25.56■■□□□ 1.68
POLR2J3-220ENST00000613744 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
POLR2J3-220ENST00000613744 WWC3Q9ULE0 1092 aa25.56■■□□□ 1.68
POLR2J3-220ENST00000613744 PTPN12Q05209 780 aaKnown RBP25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 CRY2Q49AN0 593 aa25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 LARP1BQ659C4 914 aaKnown RBP25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 CELF1Q92879 486 aaKnown RBP25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 NOL10Q9BSC4 688 aaKnown RBP25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 C10orf71Q711Q0 1435 aa25.55■■□□□ 1.68
POLR2J3-220ENST00000613744 H2AFXP16104 143 aaPredicted RBP25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 CAMK4Q16566 473 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 CCDC144BQ3MJ40 725 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 DDX46Q7L014 1031 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 SLC51AQ86UW1 340 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 CCDC144CPQ8IYA2 1237 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 ZNF592Q92610 1267 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 ZNF622Q969S3 477 aaKnown RBP eCLIP25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 A0A0G2JLW4 131 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 KLRG2A4D1S0 409 aaPredicted RBP25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 SRGNP10124 158 aa25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 PUS3Q9BZE2 481 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-220ENST00000613744 RIC1Q4ADV7 1423 aa25.53■■□□□ 1.68
POLR2J3-220ENST00000613744 H0YIN7 160 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 DHX8Q14562 1220 aaKnown RBP25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 CKAP2LQ8IYA6 745 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 SPATA32Q96LK8 384 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 L2HGDHQ9H9P8 463 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 COL11A2P13942 1736 aaPredicted RBP25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 GOLGA6L19H0YKK7 550 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 ZBTB22O15209 634 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 ELF2Q15723 593 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 LRRC24Q50LG9 513 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 IL1RAPL2Q9NP60 686 aa25.52■■□□□ 1.68
POLR2J3-220ENST00000613744 ST3GAL1Q11201 340 aa25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 CCAR2Q8N163 923 aaKnown RBP25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 RBM17Q96I25 401 aaKnown RBP25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 CTAGE5O15320 804 aa25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 SKILP12757 684 aa25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 GSDMDP57764 484 aa25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 G3BP1Q13283 466 aaKnown RBP eCLIP25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 JAKMIP1Q96N16 626 aaKnown RBP25.51■■□□□ 1.67
POLR2J3-220ENST00000613744 TTC41PQ6P2S7 1318 aa25.5■■□□□ 1.67
POLR2J3-220ENST00000613744 DPEP1P16444 411 aa25.5■■□□□ 1.67
POLR2J3-220ENST00000613744 IQCB1Q15051 598 aa25.5■■□□□ 1.67
POLR2J3-220ENST00000613744 HSP90AB4PQ58FF6 505 aa25.5■■□□□ 1.67
POLR2J3-220ENST00000613744 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
POLR2J3-220ENST00000613744 ME3Q16798 604 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 LDHAL6AQ6ZMR3 332 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 ANKRD18AQ8IVF6 992 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 LEO1Q8WVC0 666 aaPredicted RBP25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 SPEF2Q9C093 1822 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 NPR1P16066 1061 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 KCNJ6P48051 423 aa25.49■■□□□ 1.67
POLR2J3-220ENST00000613744 ANKRD1Q15327 319 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms