RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 ZNF530Q6P9A1 599 aaPredicted RBP10.09□□□□□ -0.79
LINC00547-201ENST00000612438 USP27XA6NNY8 438 aa10.09□□□□□ -0.79
LINC00547-201ENST00000612438 Q6ZUG5 572 aa10.09□□□□□ -0.79
LINC00547-201ENST00000612438 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
LINC00547-201ENST00000612438 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
LINC00547-201ENST00000612438 TRIM6Q9C030 488 aaPredicted RBP10.09□□□□□ -0.79
LINC00547-201ENST00000612438 SIL1Q9H173 461 aa10.09□□□□□ -0.79
LINC00547-201ENST00000612438 HEG1Q9ULI3 1381 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 RNMTO43148 476 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 ERLIN2O94905 339 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 SKILP12757 684 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 TRAF1Q13077 416 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 A1CFQ9NQ94 594 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 ERBB3P21860 1342 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 GCFC2P16383 781 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 HNRNPH1P31943 449 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 EIF5P55010 431 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 CCT2P78371 535 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 EDC3Q96F86 508 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 SUDS3Q9H7L9 328 aaPredicted RBP10.08□□□□□ -0.8
LINC00547-201ENST00000612438 COL15A1P39059 1388 aa10.08□□□□□ -0.8
LINC00547-201ENST00000612438 NEFHP12036 1026 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 PAX7P23759 505 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 SNW1Q13573 536 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 WWC2Q6AWC2 1192 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 SRRTQ9BXP5 876 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 DNAJC5Q9H3Z4 198 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 SLIT1O75093 1534 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 ANKRD18BA2A2Z9 1011 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 PRAMEF22A3QJZ6 481 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 CCDC69A6NI79 296 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 ATP5JP18859 108 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 RWDD2BP57060 319 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 CCZ1BP86790 482 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 CCZ1P86791 482 aaPredicted RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 CEBPZQ03701 1054 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 SCRN1Q12765 414 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 DHX40Q8IX18 779 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 KLHDC4Q8TBB5 520 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 UBXN4Q92575 508 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 KCND1Q9NSA2 647 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 SPATS2LQ9NUQ6 558 aaKnown RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 U3KPZ7 1027 aaPredicted RBP10.07□□□□□ -0.8
LINC00547-201ENST00000612438 BECN2A8MW95 431 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 PFKFB2O60825 505 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 NF2P35240 595 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 ENGASEQ8NFI3 743 aa10.07□□□□□ -0.8
LINC00547-201ENST00000612438 IGKV5-2P06315 115 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 CYP21A2P08686 494 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 AMOTQ4VCS5 1084 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 C1QTNF12Q5T7M4 302 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 JPH2Q9BR39 696 aaPredicted RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 ANO10Q9NW15 660 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 EIF3JO75822 258 aaKnown RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 CRYMQ14894 314 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 NSUN7Q8NE18 718 aaKnown RBP10.06□□□□□ -0.8
LINC00547-201ENST00000612438 CCDC26Q8TAB7 109 aa10.06□□□□□ -0.8
LINC00547-201ENST00000612438 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 TBC1D8BQ0IIM8 1120 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ESCO1Q5FWF5 840 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ATL3Q6DD88 541 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ARMCX6Q7L4S7 300 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ANKLE2Q86XL3 938 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ANAPC4Q9UJX5 808 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 MRC1P22897 1456 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 FAM160A1Q05DH4 1040 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 AIMP1Q12904 312 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 PDIA6Q15084 440 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 C1orf141Q5JVX7 400 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 LRRC59Q96AG4 307 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 USP28Q96RU2 1077 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 FTOQ9C0B1 505 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 L2HGDHQ9H9P8 463 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 DBNLQ9UJU6 430 aaKnown RBP10.05□□□□□ -0.8
LINC00547-201ENST00000612438 LMO7Q8WWI1 1683 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 ANKRD65E5RJM6 399 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 CTDNEP1O95476 244 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 MCMDC2Q4G0Z9 681 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 EPHA10Q5JZY3 1008 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms