RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 XDHP47989 1333 aa9.45□□□□□ -0.9
PTCHD3P1-201ENST00000612350 VCANP13611 3396 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 IRS4O14654 1257 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ECM2O94769 699 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CAPN2P17655 700 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 HOXD10P28358 340 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 UBXN2AP68543 259 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SYMPKQ92797 1274 aaKnown RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PAWRQ96IZ0 340 aaKnown RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ZCCHC17Q9NP64 241 aaKnown RBP9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ECM29Q5VYK3 1845 aa9.44□□□□□ -0.9
PTCHD3P1-201ENST00000612350 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 AOX1Q06278 1338 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MYPNQ86TC9 1320 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 BTBD19C9JJ37 291 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ATP5J2-PTCD1G3V325 749 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TFRCP02786 760 aaKnown RBP9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SYN1P17600 705 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 DLGAP5Q15398 846 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 RTL5Q5HYW3 569 aaPredicted RBP9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 C7orf61Q8IZ16 206 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CRISPLD2Q9H0B8 497 aa9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 BIN2Q9UBW5 565 aaPredicted RBP9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SPTBN5Q9NRC6 3674 aaKnown RBP9.43□□□□□ -0.9
PTCHD3P1-201ENST00000612350 COL2A1P02458 1487 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TNFRSF10AO00220 468 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 WDHD1O75717 1129 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 U2AF1L5P0DN76 240 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 IRX5P78411 483 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 U2AF1Q01081 240 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 VGLL4Q14135 290 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 RASA3Q14644 834 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 DIS3LQ8TF46 1054 aaKnown RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PRMT6Q96LA8 375 aaPredicted RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 UBE2OQ9C0C9 1292 aaKnown RBP9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CPA4Q9UI42 421 aa9.42□□□□□ -0.9
PTCHD3P1-201ENST00000612350 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CETPP11597 493 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MAP3K9P80192 1104 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PRKCZQ05513 592 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 NECAB2Q7Z6G3 386 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PLBD2Q8NHP8 589 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MAFAQ8NHW3 353 aaPredicted RBP9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CDX2Q99626 313 aaPredicted RBP9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 PAK6Q9NQU5 681 aaPredicted RBP9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 GABRQQ9UN88 632 aa9.41□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SPDYE5A6NIY4 337 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 GTF2IP78347 998 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 CERS5Q8N5B7 392 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 FAM163AQ96GL9 167 aaPredicted RBP9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 TEPSINQ96N21 525 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 OCEL1Q9H607 264 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 NUDCQ9Y266 331 aa9.4□□□□□ -0.9
PTCHD3P1-201ENST00000612350 MGAMO43451 1857 aa9.4□□□□□ -0.91
PTCHD3P1-201ENST00000612350 FAM205AQ6ZU69 1335 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ADCY3O60266 1144 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CCT4P50991 539 aaKnown RBP9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CFAP100Q494V2 611 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CCDC152Q4G0S7 254 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ZBTB38Q8NAP3 1195 aaPredicted RBP9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 VEZTQ9HBM0 779 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
PTCHD3P1-201ENST00000612350 SYNGAP1Q96PV0 1343 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 IRF6O14896 467 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MYO1BO43795 1136 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 INHAP05111 366 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ELNP15502 786 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 KLRK1P26718 216 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ZNF697Q5TEC3 545 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 CCDC85AQ96PX6 553 aaPredicted RBP9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 PLSCR2Q9NRY7 297 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 SNCAIPQ9Y6H5 919 aa9.38□□□□□ -0.91
PTCHD3P1-201ENST00000612350 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms