RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 DUOX1Q9NRD9 1551 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 A0A0G2JLW4 131 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 RPS6KB1P23443 525 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 AK2P54819 239 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
CBWD1-220ENST00000612045 NAA16Q6N069 864 aaPredicted RBP14.66□□□□□ -0.06
CBWD1-220ENST00000612045 ZGPATQ8N5A5 531 aaKnown RBP14.66□□□□□ -0.06
CBWD1-220ENST00000612045 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 ZNF384Q8TF68 577 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 NEK1Q96PY6 1258 aa14.66□□□□□ -0.06
CBWD1-220ENST00000612045 PATL2C9JE40 543 aaKnown RBP14.65□□□□□ -0.06
CBWD1-220ENST00000612045 APPP05067 770 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 GNAT2P19087 354 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 PRDX5P30044 214 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 MECOMQ03112 1051 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 IMMTQ16891 758 aaKnown RBP14.65□□□□□ -0.06
CBWD1-220ENST00000612045 SPTY2D1Q68D10 685 aaPredicted RBP14.65□□□□□ -0.06
CBWD1-220ENST00000612045 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
CBWD1-220ENST00000612045 LCORLQ8N3X6 602 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 SLX4Q8IY92 1834 aa14.65□□□□□ -0.06
CBWD1-220ENST00000612045 RIMBP2O15034 1052 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ZBTB7AO95365 584 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 DDIT3P35638 169 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
CBWD1-220ENST00000612045 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 E7EWF7 191 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 IGSF3O75054 1194 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ALX1Q15699 326 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 UPF1Q92900 1129 aaKnown RBP eCLIP14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ZC3H12CQ9C0D7 883 aaKnown RBP14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ZMYM6O95789 1325 aa14.64□□□□□ -0.07
CBWD1-220ENST00000612045 ZNF213O14771 459 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 LDHBP07195 334 aaKnown RBP14.63□□□□□ -0.07
CBWD1-220ENST00000612045 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
CBWD1-220ENST00000612045 HAND2P61296 217 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 CUL4AQ13619 759 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 IFNL3Q8IZI9 196 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 C7orf43Q8WVR3 580 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 RIOK1Q9BRS2 568 aaKnown RBP14.63□□□□□ -0.07
CBWD1-220ENST00000612045 COA1Q9GZY4 146 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
CBWD1-220ENST00000612045 LIMCH1Q9UPQ0 1083 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 MAST2Q6P0Q8 1798 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
CBWD1-220ENST00000612045 GSG1L2A8MUP6 293 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 PRKAB2O43741 272 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 DZIP1Q86YF9 867 aaKnown RBP14.62□□□□□ -0.07
CBWD1-220ENST00000612045 EYA3Q99504 573 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 MTFR1LQ9H019 292 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 CHMP5Q9NZZ3 219 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
CBWD1-220ENST00000612045 R3HDM1Q15032 1099 aaKnown RBP14.62□□□□□ -0.07
CBWD1-220ENST00000612045 TCEANC2Q96MN5 208 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
CBWD1-220ENST00000612045 NACAP1Q9BZK3 213 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 NAPBQ9H115 298 aa14.62□□□□□ -0.07
CBWD1-220ENST00000612045 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
CBWD1-220ENST00000612045 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
CBWD1-220ENST00000612045 ANKRD1Q15327 319 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 LAMA4Q16363 1823 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 GRIK5Q16478 980 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 FAM205AQ6ZU69 1335 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 DHX32Q7L7V1 743 aaKnown RBP14.61□□□□□ -0.07
CBWD1-220ENST00000612045 TBC1D22AQ8WUA7 517 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
CBWD1-220ENST00000612045 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
CBWD1-220ENST00000612045 POLD1P28340 1107 aa14.6□□□□□ -0.07
CBWD1-220ENST00000612045 TOB2Q14106 344 aaPredicted RBP14.6□□□□□ -0.07
CBWD1-220ENST00000612045 CC2D2BQ6DHV5 1058 aa14.6□□□□□ -0.07
CBWD1-220ENST00000612045 INTS4Q96HW7 963 aaKnown RBP14.6□□□□□ -0.07
CBWD1-220ENST00000612045 RTFDC1Q9BY42 306 aaPredicted RBP14.6□□□□□ -0.07
CBWD1-220ENST00000612045 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
CBWD1-220ENST00000612045 KIF13BQ9NQT8 1826 aa14.6□□□□□ -0.07
CBWD1-220ENST00000612045 CHD4Q14839 1912 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 DPEP1P16444 411 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 KCNA3P22001 575 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 TDO2P48775 406 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 GSTO1P78417 241 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 EXOSC10Q01780 885 aaKnown RBP14.59□□□□□ -0.07
CBWD1-220ENST00000612045 DOK7Q18PE1 504 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 TTLL6Q8N841 843 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 ZSCAN31Q96LW9 406 aaPredicted RBP14.59□□□□□ -0.07
CBWD1-220ENST00000612045 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
CBWD1-220ENST00000612045 AATFQ9NY61 560 aaKnown RBP eCLIP14.59□□□□□ -0.07
CBWD1-220ENST00000612045 SNED1Q8TER0 1413 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 KIAA1551Q9HCM1 1747 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 GTF2IP78347 998 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 Q6ZUG5 572 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
CBWD1-220ENST00000612045 TPCN1Q9ULQ1 816 aa14.59□□□□□ -0.07
CBWD1-220ENST00000612045 C21orf2O43822 256 aa14.58□□□□□ -0.08
CBWD1-220ENST00000612045 LARGE1O95461 756 aa14.58□□□□□ -0.08
CBWD1-220ENST00000612045 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
CBWD1-220ENST00000612045 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms