RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 HIP1O00291 1037 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 EXOC5O00471 708 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 DHX16O60231 1041 aaKnown RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 CYP21A2P08686 494 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 CCDC186Q7Z3E2 898 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 BRMS1Q9HCU9 246 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 ABCC6O95255 1503 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 GUCY2CP25092 1073 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 APOBRQ0VD83 1088 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 TNNI3KQ59H18 835 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 ICE2Q659A1 982 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 NEK1Q96PY6 1258 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 FPGT-TNNI3KV9GXZ4 949 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
PCDHGC3-202ENST00000611950 AFDNP55196 1824 aaKnown RBP12.46□□□□□ -0.41
PCDHGC3-202ENST00000611950 CASP7P55210 303 aa12.46□□□□□ -0.41
PCDHGC3-202ENST00000611950 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
PCDHGC3-202ENST00000611950 FHDC1Q9C0D6 1143 aaPredicted RBP12.46□□□□□ -0.41
PCDHGC3-202ENST00000611950 PTGER2P43116 358 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 CABP4P57796 275 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 PIK3R5Q8WYR1 880 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 MED4Q9NPJ6 270 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 RPS6KL1Q9Y6S9 549 aa12.46□□□□□ -0.42
PCDHGC3-202ENST00000611950 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 ATP5JP18859 108 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 HAND2P61296 217 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 ARID5BQ14865 1188 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 ZBTB3Q9H5J0 574 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 RSPH14Q9UHP6 348 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 ZNF609O15014 1411 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 PDCP20941 246 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 SCRN1Q12765 414 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 ZNF784Q8NCA9 323 aaPredicted RBP12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 SYT17Q9BSW7 474 aa12.45□□□□□ -0.42
PCDHGC3-202ENST00000611950 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 ZNF165P49910 485 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 RIOK3O14730 519 aaKnown RBP12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 GTF3C6Q969F1 213 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 CHD4Q14839 1912 aa12.44□□□□□ -0.42
PCDHGC3-202ENST00000611950 TNNT1P13805 278 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 SCP2P22307 547 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 BIRC2Q13490 618 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 GOLGB1Q14789 3259 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 MYBPC2Q14324 1141 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 FOXO4P98177 505 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 USPL1Q5W0Q7 1092 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 C11orf57Q6ZUT1 292 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 MNS1Q8NEH6 495 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 FAM210AQ96ND0 272 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
PCDHGC3-202ENST00000611950 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 LRCH2Q5VUJ6 765 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 BCL9O00512 1426 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 COQ9O75208 318 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 FILIP1Q7Z7B0 1213 aa12.42□□□□□ -0.42
PCDHGC3-202ENST00000611950 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms