RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PATL2C9JE40 543 aaKnown RBP15.99■□□□□ 0.15
NEK3-205ENST00000610828 GUCY1B3Q02153 619 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 NAPBQ9H115 298 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
NEK3-205ENST00000610828 TAF1P21675 1872 aa15.99■□□□□ 0.15
NEK3-205ENST00000610828 BTAF1O14981 1849 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 DHX16O60231 1041 aaKnown RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 ZPR1O75312 459 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 IFNL3Q8IZI9 196 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 B4E1Z4 1266 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 LIG1P18858 919 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 GYG1P46976 350 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
NEK3-205ENST00000610828 PDLIM2Q96JY6 352 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 HPS5Q9UPZ3 1129 aa15.98■□□□□ 0.15
NEK3-205ENST00000610828 CPLX1O14810 134 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 NBPF5PQ86XG9 351 aaPredicted RBP15.97■□□□□ 0.15
NEK3-205ENST00000610828 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
NEK3-205ENST00000610828 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 ANGEL1Q9UNK9 670 aaKnown RBP15.97■□□□□ 0.15
NEK3-205ENST00000610828 NEDD4P46934 1319 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 ALX1Q15699 326 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
NEK3-205ENST00000610828 RTCBQ9Y3I0 505 aaKnown RBP15.97■□□□□ 0.15
NEK3-205ENST00000610828 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 UBE4AQ14139 1066 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 VPS37DQ86XT2 251 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 LCORLQ8N3X6 602 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
NEK3-205ENST00000610828 ZMYM6O95789 1325 aa15.96■□□□□ 0.15
NEK3-205ENST00000610828 CASZ1Q86V15 1759 aa15.96■□□□□ 0.14
NEK3-205ENST00000610828 RGL2O15211 777 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 PRKAB2O43741 272 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 CTDSPL2Q05D32 466 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 CAMK4Q16566 473 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 NUP62CLQ9H1M0 184 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 INCENPQ9NQS7 918 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 DACT1Q9NYF0 836 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 SLC4A4Q9Y6R1 1079 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 GSG1L2A8MUP6 293 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 TDO2P48775 406 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 CAVIN4Q5BKX8 364 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 MEX3CQ5U5Q3 659 aaKnown RBP15.95■□□□□ 0.14
NEK3-205ENST00000610828 PGBD1Q96JS3 809 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 ORC3Q9UBD5 711 aaPredicted RBP15.95■□□□□ 0.14
NEK3-205ENST00000610828 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 THSD7AQ9UPZ6 1657 aa15.95■□□□□ 0.14
NEK3-205ENST00000610828 SH2B2O14492 632 aaPredicted RBP15.94■□□□□ 0.14
NEK3-205ENST00000610828 GNAT2P19087 354 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
NEK3-205ENST00000610828 CYP7A1P22680 504 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 ADD1P35611 737 aaKnown RBP15.94■□□□□ 0.14
NEK3-205ENST00000610828 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
NEK3-205ENST00000610828 C8orf76Q96K31 380 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 FUCA2Q9BTY2 467 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 RAI14Q9P0K7 980 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
NEK3-205ENST00000610828 RXRAP19793 462 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 CLCN1P35523 988 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
NEK3-205ENST00000610828 OTUD7BQ6GQQ9 843 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 TPTE2Q6XPS3 522 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 TMEM87BQ96K49 555 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 A0A1B0GUL6 1792 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 MYH15Q9Y2K3 1946 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 NPHP1O15259 732 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
NEK3-205ENST00000610828 MAP3K11Q16584 847 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 GJD4Q96KN9 370 aaPredicted RBP15.93■□□□□ 0.14
NEK3-205ENST00000610828 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 TNMDQ9H2S6 317 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
NEK3-205ENST00000610828 KDM4AO75164 1064 aa15.92■□□□□ 0.14
NEK3-205ENST00000610828 NR1I2O75469 434 aa15.92■□□□□ 0.14
NEK3-205ENST00000610828 AKNAD1Q5T1N1 836 aa15.92■□□□□ 0.14
NEK3-205ENST00000610828 APOA5Q6Q788 366 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms