RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	ME1	P48163	572 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	RC3H1	Q5TC82	1133 aa	Known RBP	11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	RUFY3	Q7L099	469 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	TPCN1	Q9ULQ1	816 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	MROH5	Q6ZUA9	1318 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	RNF113A	O15541	343 aa	Known RBP	11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	OFD1	O75665	1012 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	NUCB2	P80303	420 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	CCDC102B	Q68D86	513 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	LPIN2	Q92539	896 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.54	□□□□□ -0.56	1e-6	■□□□□ 10.8
CTCFL-222	ENST00000609232	LIMCH1	Q9UPQ0	1083 aa		11.54	□□□□□ -0.56
CTCFL-222	ENST00000609232	UQCRHL	A0A096LP55	91 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	UQCRH	P07919	91 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	ZFP91	Q96JP5	570 aa	Predicted RBP	11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	PUS7L	Q9H0K6	701 aa	Known RBP	11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	SLC27A2	O14975	620 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	PSMA5	P28066	241 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	AMIGO3	Q86WK7	504 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	NEK1	Q96PY6	1258 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	ZNF609	O15014	1411 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	APBA3	O96018	575 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	CHRND	Q07001	517 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	C3orf67	Q6ZVT6	689 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	LRRC4B	Q9NT99	713 aa		11.53	□□□□□ -0.56
CTCFL-222	ENST00000609232	PES1	O00541	588 aa	Known RBP	11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	STX6	O43752	255 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	DHX8	Q14562	1220 aa	Known RBP	11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	ZNF772	Q68DY9	489 aa	Predicted RBP	11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	CDC37L1	Q7L3B6	337 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	CERS3	Q8IU89	383 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	RASSF8	Q8NHQ8	419 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	MAP4K1	Q92918	833 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	USP25	Q9UHP3	1055 aa		11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	SAP30BP	Q9UHR5	308 aa	Known RBP	11.52	□□□□□ -0.56
CTCFL-222	ENST00000609232	GOLGA8B	A8MQT2	603 aa		11.52	□□□□□ -0.57
CTCFL-222	ENST00000609232	RBM6	P78332	1123 aa	Known RBP	11.52	□□□□□ -0.57
CTCFL-222	ENST00000609232	PICALM	Q13492	652 aa		11.52	□□□□□ -0.57
CTCFL-222	ENST00000609232	BCL2L12	Q9HB09	334 aa		11.52	□□□□□ -0.57
CTCFL-222	ENST00000609232	UQCRFS1P1	P0C7P4	283 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	MCAM	P43121	646 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	CNBD1	Q8NA66	436 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	OSBP2	Q969R2	916 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232		U3KPZ7	1027 aa	Predicted RBP	11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	NUP188	Q5SRE5	1749 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	KLF18	A0A0U1RQI7	1052 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	CYP21A2	P08686	494 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	SLURP2	P0DP57	97 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	CELF1	Q92879	486 aa	Known RBP	11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	NAPB	Q9H115	298 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	MYH14	Q7Z406	1995 aa	Known RBP	11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZNF213	O14771	459 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	EPB41L2	O43491	1005 aa	Known RBP	11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	MBD4	O95243	580 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	ERCC3	P19447	782 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	NECTIN1	Q15223	517 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZNF592	Q92610	1267 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	EEF2KMT	Q96G04	330 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	SDF4	Q9BRK5	362 aa		11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.51	□□□□□ -0.57
CTCFL-222	ENST00000609232	ONECUT3	O60422	494 aa	Predicted RBP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	CYP7A1	P22680	504 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	ADD1	P35611	737 aa	Known RBP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	RPS8	P62241	208 aa	Known RBP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	WNK3	Q9BYP7	1800 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZSCAN25	Q6NSZ9	544 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	HELLS	Q9NRZ9	838 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	TJP1	Q07157	1748 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	RXRB	P28702	533 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	NFIX	Q14938	502 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	TXNRD1	Q16881	649 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	TMED8	Q6PL24	325 aa	Predicted RBP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	CNPY4	Q8N129	248 aa		11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	GNL3L	Q9NVN8	582 aa	Known RBP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CTCFL-222	ENST00000609232	ATRN	O75882	1429 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZBTB22	O15209	634 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZFY	P08048	801 aa	Predicted RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	TTF1	Q15361	905 aa	Predicted RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	CAVIN4	Q5BKX8	364 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	FAM47A	Q5JRC9	791 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	HOMER1	Q86YM7	354 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	CPVL	Q9H3G5	476 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	CWC22	Q9HCG8	908 aa	Known RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	TMEM63C	Q9P1W3	806 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	NUP98	P52948	1817 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	MAST3	O60307	1309 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	COBL	O75128	1261 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	KLRK1	P26718	216 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	MAP3K12	Q12852	859 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZMYM1	Q5SVZ6	1142 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	SPATA5	Q8NB90	893 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	RPGR	Q92834	1020 aa	Known RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232		M0R2C6	588 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	IFIT3	O14879	490 aa	Known RBP	11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	GPAA1	O43292	621 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	EVX2	Q03828	476 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	SPATA32	Q96LK8	384 aa		11.49	□□□□□ -0.57
CTCFL-222	ENST00000609232	STX8	Q9UNK0	236 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms