RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 STOX1Q6ZVD7 989 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 ARMT1Q9H993 441 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 CWC22Q9HCG8 908 aaKnown RBP25.67■■□□□ 1.7
USP6NL-204ENST00000606752 LRRC37AA6NMS7 1700 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 A0A0G2JLW4 131 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 IL1R1P14778 569 aa25.67■■□□□ 1.7
USP6NL-204ENST00000606752 COL9A3Q14050 684 aaPredicted RBP25.67■■□□□ 1.7
USP6NL-204ENST00000606752 ILDR1Q86SU0 546 aaPredicted RBP25.67■■□□□ 1.7
USP6NL-204ENST00000606752 NSUN4Q96CB9 384 aaKnown RBP25.67■■□□□ 1.7
USP6NL-204ENST00000606752 E7EWF7 191 aa25.66■■□□□ 1.7
USP6NL-204ENST00000606752 ANKRD1Q15327 319 aa25.66■■□□□ 1.7
USP6NL-204ENST00000606752 MIGA1Q8NAN2 632 aa25.66■■□□□ 1.7
USP6NL-204ENST00000606752 INTS4Q96HW7 963 aaKnown RBP25.66■■□□□ 1.7
USP6NL-204ENST00000606752 ZNF213O14771 459 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 COL11A2P13942 1736 aaPredicted RBP25.65■■□□□ 1.7
USP6NL-204ENST00000606752 ADGRA1Q86SQ6 560 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 CNKSR1Q969H4 720 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 MAGEB6P1A0A0J9YX57 407 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 MECOMQ03112 1051 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 DPP8Q6V1X1 898 aaPredicted RBP25.65■■□□□ 1.7
USP6NL-204ENST00000606752 LCORLQ8N3X6 602 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 ZNF384Q8TF68 577 aa25.65■■□□□ 1.7
USP6NL-204ENST00000606752 ZSCAN31Q96LW9 406 aaPredicted RBP25.65■■□□□ 1.7
USP6NL-204ENST00000606752 ZMYM6O95789 1325 aa25.64■■□□□ 1.7
USP6NL-204ENST00000606752 PRDX5P30044 214 aa25.64■■□□□ 1.7
USP6NL-204ENST00000606752 CHRNA5P30532 468 aa25.64■■□□□ 1.7
USP6NL-204ENST00000606752 OLFM4Q6UX06 510 aa25.64■■□□□ 1.7
USP6NL-204ENST00000606752 JAG2Q9Y219 1238 aa25.64■■□□□ 1.7
USP6NL-204ENST00000606752 GSG1L2A8MUP6 293 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 HAND2P61296 217 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 DHX32Q7L7V1 743 aaKnown RBP25.63■■□□□ 1.69
USP6NL-204ENST00000606752 IFNL3Q8IZI9 196 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 SLC4A4Q9Y6R1 1079 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 LTBP1Q14766 1721 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 TCEANC2Q96MN5 208 aa25.63■■□□□ 1.69
USP6NL-204ENST00000606752 RIOK1Q9BRS2 568 aaKnown RBP25.63■■□□□ 1.69
USP6NL-204ENST00000606752 LARP6Q9BRS8 491 aaKnown RBP25.63■■□□□ 1.69
USP6NL-204ENST00000606752 ZC3H12CQ9C0D7 883 aaKnown RBP25.63■■□□□ 1.69
USP6NL-204ENST00000606752 NACAP1Q9BZK3 213 aa25.62■■□□□ 1.69
USP6NL-204ENST00000606752 COA1Q9GZY4 146 aa25.62■■□□□ 1.69
USP6NL-204ENST00000606752 SH2B1Q9NRF2 756 aaPredicted RBP25.62■■□□□ 1.69
USP6NL-204ENST00000606752 MYH13Q9UKX3 1938 aa25.62■■□□□ 1.69
USP6NL-204ENST00000606752 CACNA1SQ13698 1873 aa25.62■■□□□ 1.69
USP6NL-204ENST00000606752 LDHBP07195 334 aaKnown RBP25.61■■□□□ 1.69
USP6NL-204ENST00000606752 NAPBQ9H115 298 aa25.61■■□□□ 1.69
USP6NL-204ENST00000606752 EPB41L4AQ9HCS5 686 aaPredicted RBP25.61■■□□□ 1.69
USP6NL-204ENST00000606752 PRKAB2O43741 272 aa25.6■■□□□ 1.69
USP6NL-204ENST00000606752 EXOSC10Q01780 885 aaKnown RBP25.6■■□□□ 1.69
USP6NL-204ENST00000606752 TOB2Q14106 344 aaPredicted RBP25.6■■□□□ 1.69
USP6NL-204ENST00000606752 DZIP1Q86YF9 867 aaKnown RBP25.6■■□□□ 1.69
USP6NL-204ENST00000606752 C10orf71Q711Q0 1435 aa25.59■■□□□ 1.69
USP6NL-204ENST00000606752 RIMBP2O15034 1052 aa25.59■■□□□ 1.69
USP6NL-204ENST00000606752 TPCN1Q9ULQ1 816 aa25.59■■□□□ 1.69
USP6NL-204ENST00000606752 Q6ZUG5 572 aa25.58■■□□□ 1.69
USP6NL-204ENST00000606752 EYA3Q99504 573 aa25.58■■□□□ 1.69
USP6NL-204ENST00000606752 ANP32EQ9BTT0 268 aa25.58■■□□□ 1.69
USP6NL-204ENST00000606752 LARGE1O95461 756 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 DYNLL1P63167 89 aaKnown RBP25.57■■□□□ 1.68
USP6NL-204ENST00000606752 NFKBIBQ15653 356 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 ME3Q16798 604 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 NCOA7Q8NI08 942 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 TBC1D22AQ8WUA7 517 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 C7orf43Q8WVR3 580 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 NBPF3Q9H094 633 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 FAM205AQ6ZU69 1335 aa25.57■■□□□ 1.68
USP6NL-204ENST00000606752 DUOX1Q9NRD9 1551 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 TDO2P48775 406 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 GSTO1P78417 241 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 RAB3GAP1Q15042 981 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 NUCB2P80303 420 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 TRDNQ13061 729 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 CC2D2BQ6DHV5 1058 aa25.56■■□□□ 1.68
USP6NL-204ENST00000606752 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.56■■□□□ 1.68
USP6NL-204ENST00000606752 FGD1P98174 961 aa25.55■■□□□ 1.68
USP6NL-204ENST00000606752 NBR1Q14596 966 aa25.55■■□□□ 1.68
USP6NL-204ENST00000606752 RALYLQ86SE5 291 aaKnown RBP25.55■■□□□ 1.68
USP6NL-204ENST00000606752 SDR42E1Q8WUS8 393 aa25.55■■□□□ 1.68
USP6NL-204ENST00000606752 AGXT2Q9BYV1 514 aa25.55■■□□□ 1.68
USP6NL-204ENST00000606752 LDHCP07864 332 aa25.54■■□□□ 1.68
USP6NL-204ENST00000606752 GRIK5Q16478 980 aa25.54■■□□□ 1.68
USP6NL-204ENST00000606752 TBC1D10CQ8IV04 446 aa25.54■■□□□ 1.68
USP6NL-204ENST00000606752 FBXL16Q8N461 479 aa25.54■■□□□ 1.68
USP6NL-204ENST00000606752 RTFDC1Q9BY42 306 aaPredicted RBP25.54■■□□□ 1.68
USP6NL-204ENST00000606752 AATFQ9NY61 560 aaKnown RBP eCLIP25.54■■□□□ 1.68
USP6NL-204ENST00000606752 SLX4Q8IY92 1834 aa25.54■■□□□ 1.68
USP6NL-204ENST00000606752 MCM5P33992 734 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 MFSD14BQ5SR56 506 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 GIMAP6Q6P9H5 292 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 MB21D2Q8IYB1 491 aaPredicted RBP25.53■■□□□ 1.68
USP6NL-204ENST00000606752 LRRC2Q9BYS8 371 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 ZBTB7AO95365 584 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 GTF2IP78347 998 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 CCDC83Q8IWF9 413 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 BRF1Q92994 677 aa25.53■■□□□ 1.68
USP6NL-204ENST00000606752 CRNKL1Q9BZJ0 848 aaKnown RBP25.53■■□□□ 1.68
USP6NL-204ENST00000606752 ZNF219Q9P2Y4 722 aaPredicted RBP25.53■■□□□ 1.68
USP6NL-204ENST00000606752 G3V3G9 751 aa25.52■■□□□ 1.68
USP6NL-204ENST00000606752 DCAF8Q5TAQ9 597 aa25.52■■□□□ 1.68
USP6NL-204ENST00000606752 TTLL6Q8N841 843 aa25.52■■□□□ 1.68
USP6NL-204ENST00000606752 MTFR1LQ9H019 292 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms