RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 RAB15P59190 212 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 TRAPPC3LQ5T215 181 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 C16orf71Q8IYS4 520 aaPredicted RBP11.53□□□□□ -0.56
SH3D19-212ENST00000604440 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
SH3D19-212ENST00000604440 KDF1Q8NAX2 398 aaPredicted RBP11.53□□□□□ -0.56
SH3D19-212ENST00000604440 APAF1O14727 1248 aa11.52□□□□□ -0.57
SH3D19-212ENST00000604440 HTATSF1O43719 755 aaKnown RBP11.52□□□□□ -0.57
SH3D19-212ENST00000604440 RPS6KA4O75676 772 aa11.52□□□□□ -0.57
SH3D19-212ENST00000604440 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
SH3D19-212ENST00000604440 ZNF790Q6PG37 636 aa11.52□□□□□ -0.57
SH3D19-212ENST00000604440 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
SH3D19-212ENST00000604440 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.57
SH3D19-212ENST00000604440 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
SH3D19-212ENST00000604440 ZNF496Q96IT1 587 aaPredicted RBP11.52□□□□□ -0.57
SH3D19-212ENST00000604440 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
SH3D19-212ENST00000604440 TRIM34Q9BYJ4 488 aa11.51□□□□□ -0.57
SH3D19-212ENST00000604440 PIM2Q9P1W9 311 aa11.51□□□□□ -0.57
SH3D19-212ENST00000604440 PARP3Q9Y6F1 533 aa11.51□□□□□ -0.57
SH3D19-212ENST00000604440 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
SH3D19-212ENST00000604440 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
SH3D19-212ENST00000604440 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
SH3D19-212ENST00000604440 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
SH3D19-212ENST00000604440 DDR1Q08345 913 aa11.5□□□□□ -0.57
SH3D19-212ENST00000604440 TAF7Q15545 349 aaPredicted RBP11.5□□□□□ -0.57
SH3D19-212ENST00000604440 VWA5B2Q8N398 1253 aa11.5□□□□□ -0.57
SH3D19-212ENST00000604440 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
SH3D19-212ENST00000604440 LAS1LQ9Y4W2 734 aaKnown RBP11.5□□□□□ -0.57
SH3D19-212ENST00000604440 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
SH3D19-212ENST00000604440 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
SH3D19-212ENST00000604440 HSPA1AP0DMV8 641 aaKnown RBP11.49□□□□□ -0.57
SH3D19-212ENST00000604440 HSPA1BP0DMV9 641 aaKnown RBP11.49□□□□□ -0.57
SH3D19-212ENST00000604440 RFC4P35249 363 aa11.49□□□□□ -0.57
SH3D19-212ENST00000604440 PTGIRP43119 386 aa11.49□□□□□ -0.57
SH3D19-212ENST00000604440 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
SH3D19-212ENST00000604440 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
SH3D19-212ENST00000604440 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
SH3D19-212ENST00000604440 FMNL2Q96PY5 1086 aa11.49□□□□□ -0.57
SH3D19-212ENST00000604440 CDC14CA4D256 554 aa11.48□□□□□ -0.57
SH3D19-212ENST00000604440 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
SH3D19-212ENST00000604440 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
SH3D19-212ENST00000604440 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
SH3D19-212ENST00000604440 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
SH3D19-212ENST00000604440 COL11A2P13942 1736 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 POLRMTO00411 1230 aaKnown RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
SH3D19-212ENST00000604440 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 CANXP27824 592 aaKnown RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 INTS5Q6P9B9 1019 aaKnown RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 SV2AQ7L0J3 742 aa11.47□□□□□ -0.57
SH3D19-212ENST00000604440 ZBTB1Q9Y2K1 713 aa11.47□□□□□ -0.57
SH3D19-212ENST00000604440 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
SH3D19-212ENST00000604440 SCN7AQ01118 1682 aa11.46□□□□□ -0.57
SH3D19-212ENST00000604440 GLTPD2A6NH11 291 aa11.46□□□□□ -0.57
SH3D19-212ENST00000604440 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
SH3D19-212ENST00000604440 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
SH3D19-212ENST00000604440 A1BGP04217 495 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 TM4SF1P30408 202 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 CHRNA5P30532 468 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 RASSF7Q02833 373 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 CYLDQ9NQC7 956 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
SH3D19-212ENST00000604440 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
SH3D19-212ENST00000604440 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-212ENST00000604440 STARD3NLO95772 234 aa11.44□□□□□ -0.58
SH3D19-212ENST00000604440 SNRPA1P09661 255 aaKnown RBP11.44□□□□□ -0.58
SH3D19-212ENST00000604440 VEGFAP15692 232 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-212ENST00000604440 LMNB1P20700 586 aa11.44□□□□□ -0.58
SH3D19-212ENST00000604440 EIF4A1P60842 406 aaKnown RBP11.44□□□□□ -0.58
SH3D19-212ENST00000604440 KRT24Q2M2I5 525 aa11.44□□□□□ -0.58
SH3D19-212ENST00000604440 SVOPQ8N4V2 548 aa11.44□□□□□ -0.58
SH3D19-212ENST00000604440 COL15A1P39059 1388 aa11.43□□□□□ -0.58
SH3D19-212ENST00000604440 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
SH3D19-212ENST00000604440 SCN4AP35499 1836 aa11.42□□□□□ -0.58
SH3D19-212ENST00000604440 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
SH3D19-212ENST00000604440 RNF225M0QZC1 329 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-212ENST00000604440 LYSMD3Q7Z3D4 306 aa11.42□□□□□ -0.58
SH3D19-212ENST00000604440 KCTD17Q8N5Z5 321 aa11.42□□□□□ -0.58
SH3D19-212ENST00000604440 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-212ENST00000604440 MBIPQ9NS73 344 aa11.42□□□□□ -0.58
SH3D19-212ENST00000604440 CUEDC1Q9NWM3 386 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-212ENST00000604440 ZBBXA8MT70 800 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 NFKBIEO00221 500 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 CHL1O00533 1208 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
SH3D19-212ENST00000604440 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 NGEFQ8N5V2 710 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 THSD7BQ9C0I4 1608 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
SH3D19-212ENST00000604440 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
SH3D19-212ENST00000604440 FBXO45P0C2W1 286 aa11.4□□□□□ -0.58
SH3D19-212ENST00000604440 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-212ENST00000604440 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
SH3D19-212ENST00000604440 NBPF10Q6P3W6 841 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms