RNA–Protein interactions for RNA: ENST00000604278.1

AL049829.3-202, humanhuman

BASIC

Gene AL049829.3, Length 711 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-202ENST00000604278 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.81□□□□□ -0.68
AL049829.3-202ENST00000604278 CPA4Q9UI42 421 aa10.81□□□□□ -0.68
AL049829.3-202ENST00000604278 LTBP2Q14767 1821 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 USP34Q70CQ2 3546 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 SPDYE5A6NIY4 337 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 ELNP15502 786 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 SNAPC2Q13487 334 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 MXD3Q9BW11 206 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 GABRQQ9UN88 632 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 C5orf42Q9H799 3197 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 PFASO15067 1338 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 MAST2Q6P0Q8 1798 aa10.8□□□□□ -0.68
AL049829.3-202ENST00000604278 MED23Q9ULK4 1368 aa10.79□□□□□ -0.68
AL049829.3-202ENST00000604278 MYO1BO43795 1136 aa10.79□□□□□ -0.68
AL049829.3-202ENST00000604278 FLT3LGP49771 235 aa10.79□□□□□ -0.68
AL049829.3-202ENST00000604278 CSADQ9Y600 493 aa10.79□□□□□ -0.68
AL049829.3-202ENST00000604278 XDHP47989 1333 aa10.79□□□□□ -0.68
AL049829.3-202ENST00000604278 GPR37L1O60883 481 aa10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 DLGAP5Q15398 846 aa10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 LRP10Q7Z4F1 713 aa10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 KIAA0825Q8IV33 1275 aa10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
AL049829.3-202ENST00000604278 MAP3K9P80192 1104 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 AKNAD1Q5T1N1 836 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 ANKRD23Q86SG2 305 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 ERO1BQ86YB8 467 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 OGDHLQ9ULD0 1010 aa10.77□□□□□ -0.69
AL049829.3-202ENST00000604278 IRF6O14896 467 aa10.76□□□□□ -0.69
AL049829.3-202ENST00000604278 BCRP11274 1271 aa10.76□□□□□ -0.69
AL049829.3-202ENST00000604278 COL6A1P12109 1028 aa10.76□□□□□ -0.69
AL049829.3-202ENST00000604278 ATP2B4P23634 1241 aa10.76□□□□□ -0.69
AL049829.3-202ENST00000604278 RASA3Q14644 834 aa10.76□□□□□ -0.69
AL049829.3-202ENST00000604278 CHD9Q3L8U1 2897 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 PPIL2Q13356 520 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 TNFAIP1Q13829 316 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 GRIN2CQ14957 1233 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 SHHQ15465 462 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 LRRC26Q2I0M4 334 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 MCM10Q7L590 875 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 FBXW7Q969H0 707 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 COA1Q9GZY4 146 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 EPHX3Q9H6B9 360 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 C11orf16Q9NQ32 467 aa10.75□□□□□ -0.69
AL049829.3-202ENST00000604278 CLRN2A0PK11 232 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 PDHXO00330 501 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 HMGCRP04035 888 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 TTLL5Q6EMB2 1281 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 NECAB3Q96P71 396 aaPredicted RBP10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 PARK7Q99497 189 aaKnown RBP10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 PANK3Q9H999 370 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 TCF20Q9UGU0 1960 aaKnown RBP10.74□□□□□ -0.69
AL049829.3-202ENST00000604278 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
AL049829.3-202ENST00000604278 BMP1P13497 986 aa10.73□□□□□ -0.69
AL049829.3-202ENST00000604278 NHLH1Q02575 133 aa10.73□□□□□ -0.69
AL049829.3-202ENST00000604278 PHACTR3Q96KR7 559 aa10.73□□□□□ -0.69
AL049829.3-202ENST00000604278 TNPO2O14787 897 aaKnown RBP10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 EIF4A1P60842 406 aaKnown RBP10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 C9orf50Q5SZB4 431 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 POTEEQ6S8J3 1075 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 FAM89AQ96GI7 184 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 TEPSINQ96N21 525 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 KCNH6Q9H252 994 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 CHD7Q9P2D1 2997 aa10.72□□□□□ -0.69
AL049829.3-202ENST00000604278 PPATQ06203 517 aa10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 PDIA6Q15084 440 aa10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 ZBTB38Q8NAP3 1195 aaPredicted RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 PRMT6Q96LA8 375 aaPredicted RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 GAS2L1Q99501 681 aaPredicted RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 PRKAG2Q9UGJ0 569 aa10.71□□□□□ -0.69
AL049829.3-202ENST00000604278 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 AAK1Q2M2I8 961 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 CFAP100Q494V2 611 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 THUMPD2Q9BTF0 503 aaKnown RBP10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 ZNF576Q9H609 170 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 SEC31BQ9NQW1 1179 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 MIS18AQ9NYP9 233 aa10.7□□□□□ -0.7
AL049829.3-202ENST00000604278 PRR33A8MZF0 331 aa10.69□□□□□ -0.7
AL049829.3-202ENST00000604278 IRS4O14654 1257 aaPredicted RBP10.69□□□□□ -0.7
AL049829.3-202ENST00000604278 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
AL049829.3-202ENST00000604278 DNAJB2P25686 324 aa10.69□□□□□ -0.7
AL049829.3-202ENST00000604278 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms