RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RNF20Q5VTR2 975 aa18.09■□□□□ 0.49
VRK3-218ENST00000600031 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
VRK3-218ENST00000600031 ZC3H12CQ9C0D7 883 aaKnown RBP18.09■□□□□ 0.49
VRK3-218ENST00000600031 ST18O60284 1047 aa18.08■□□□□ 0.49
VRK3-218ENST00000600031 CYP21A2P08686 494 aa18.08■□□□□ 0.49
VRK3-218ENST00000600031 PTMSP20962 102 aa18.08■□□□□ 0.49
VRK3-218ENST00000600031 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.49
VRK3-218ENST00000600031 AIDAQ96BJ3 306 aa18.08■□□□□ 0.49
VRK3-218ENST00000600031 MBD4O95243 580 aa18.08■□□□□ 0.48
VRK3-218ENST00000600031 MECOMQ03112 1051 aa18.08■□□□□ 0.48
VRK3-218ENST00000600031 TTLL6Q8N841 843 aa18.08■□□□□ 0.48
VRK3-218ENST00000600031 NSUN4Q96CB9 384 aaKnown RBP18.08■□□□□ 0.48
VRK3-218ENST00000600031 JAKMIP1Q96N16 626 aaKnown RBP18.08■□□□□ 0.48
VRK3-218ENST00000600031 SALL1Q9NSC2 1324 aa18.08■□□□□ 0.48
VRK3-218ENST00000600031 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 NAA16Q6N069 864 aaPredicted RBP18.07■□□□□ 0.48
VRK3-218ENST00000600031 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 ARMT1Q9H993 441 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 ISY1Q9ULR0 285 aaKnown RBP18.07■□□□□ 0.48
VRK3-218ENST00000600031 C21orf2O43822 256 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 FGAP02671 866 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 CPA1P15085 419 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 CASTP20810 708 aaKnown RBP18.07■□□□□ 0.48
VRK3-218ENST00000600031 GRIK5Q16478 980 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 COA1Q9GZY4 146 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 CHD4Q14839 1912 aa18.07■□□□□ 0.48
VRK3-218ENST00000600031 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
VRK3-218ENST00000600031 K7ELQ4 463 aaPredicted RBP18.06■□□□□ 0.48
VRK3-218ENST00000600031 COL9A3Q14050 684 aaPredicted RBP18.06■□□□□ 0.48
VRK3-218ENST00000600031 DOK7Q18PE1 504 aa18.06■□□□□ 0.48
VRK3-218ENST00000600031 LCORLQ8N3X6 602 aa18.06■□□□□ 0.48
VRK3-218ENST00000600031 ZGPATQ8N5A5 531 aaKnown RBP18.06■□□□□ 0.48
VRK3-218ENST00000600031 TM6SF1Q9BZW5 370 aa18.06■□□□□ 0.48
VRK3-218ENST00000600031 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
VRK3-218ENST00000600031 SPTY2D1Q68D10 685 aaPredicted RBP18.05■□□□□ 0.48
VRK3-218ENST00000600031 EYA3Q99504 573 aa18.05■□□□□ 0.48
VRK3-218ENST00000600031 RPAP1Q9BWH6 1393 aaPredicted RBP18.05■□□□□ 0.48
VRK3-218ENST00000600031 RTFDC1Q9BY42 306 aaPredicted RBP18.05■□□□□ 0.48
VRK3-218ENST00000600031 ZSWIM6Q9HCJ5 1215 aa18.05■□□□□ 0.48
VRK3-218ENST00000600031 LDHBP07195 334 aaKnown RBP18.04■□□□□ 0.48
VRK3-218ENST00000600031 TGFB2P61812 414 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 TTC14Q96N46 770 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 CTNNA3Q9UI47 895 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 CCDC88AQ3V6T2 1871 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 KIAA1551Q9HCM1 1747 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 FAM205AQ6ZU69 1335 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 MAGEB6P1A0A0J9YX57 407 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 PATL2C9JE40 543 aaKnown RBP18.04■□□□□ 0.48
VRK3-218ENST00000600031 PRKAB2O43741 272 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 APPP05067 770 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
VRK3-218ENST00000600031 STOX1Q6ZVD7 989 aa18.04■□□□□ 0.48
VRK3-218ENST00000600031 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
VRK3-218ENST00000600031 RIOK1Q9BRS2 568 aaKnown RBP18.04■□□□□ 0.48
VRK3-218ENST00000600031 HSP90AA1P07900 732 aaKnown RBP18.03■□□□□ 0.48
VRK3-218ENST00000600031 PTGER2P43116 358 aa18.03■□□□□ 0.48
VRK3-218ENST00000600031 DYNLL1P63167 89 aaKnown RBP18.03■□□□□ 0.48
VRK3-218ENST00000600031 GTF2IP78347 998 aa18.03■□□□□ 0.48
VRK3-218ENST00000600031 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
VRK3-218ENST00000600031 RUFY3Q7L099 469 aa18.03■□□□□ 0.48
VRK3-218ENST00000600031 DZIP1Q86YF9 867 aaKnown RBP18.03■□□□□ 0.48
VRK3-218ENST00000600031 GSG1L2A8MUP6 293 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 PSMA5P28066 241 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 MRE11P49959 708 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 HAND2P61296 217 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 KRT32Q14532 448 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
VRK3-218ENST00000600031 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
VRK3-218ENST00000600031 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 SLC4A4Q9Y6R1 1079 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 MAST2Q6P0Q8 1798 aa18.02■□□□□ 0.48
VRK3-218ENST00000600031 MFSD14BQ5SR56 506 aa18.02■□□□□ 0.47
VRK3-218ENST00000600031 IFNL3Q8IZI9 196 aa18.02■□□□□ 0.47
VRK3-218ENST00000600031 GZF1Q9H116 711 aaPredicted RBP18.02■□□□□ 0.47
VRK3-218ENST00000600031 DBNDD1Q9H9R9 158 aa18.02■□□□□ 0.47
VRK3-218ENST00000600031 G3V3G9 751 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 GNAT2P19087 354 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 ALX1Q15699 326 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
VRK3-218ENST00000600031 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 BLOC1S2Q6QNY1 142 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
VRK3-218ENST00000600031 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 PIM2Q9P1W9 311 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 E7EWF7 191 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 MCM2P49736 904 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 AK2P54819 239 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 CCDC93Q567U6 631 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 PDRG1Q9NUG6 133 aa18.01■□□□□ 0.47
VRK3-218ENST00000600031 IGSF3O75054 1194 aa18■□□□□ 0.47
VRK3-218ENST00000600031 DIXDC1Q155Q3 683 aa18■□□□□ 0.47
VRK3-218ENST00000600031 AOC3Q16853 763 aa18■□□□□ 0.47
VRK3-218ENST00000600031 TMED8Q6PL24 325 aaPredicted RBP18■□□□□ 0.47
VRK3-218ENST00000600031 KLHL34Q8N239 644 aa18■□□□□ 0.47
VRK3-218ENST00000600031 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms