RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 U3KPZ7 1027 aaPredicted RBP18.04■□□□□ 0.48
PNKP-204ENST00000594661 ADCY5O95622 1261 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 TPM3P06753 285 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 CHRNDQ07001 517 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 TSGA10IPQ3SY00 556 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 NBPF5PQ86XG9 351 aaPredicted RBP18.03■□□□□ 0.48
PNKP-204ENST00000594661 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.03■□□□□ 0.48
PNKP-204ENST00000594661 MYH7P12883 1935 aa18.03■□□□□ 0.48
PNKP-204ENST00000594661 PSMA5P28066 241 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 RFC4P35249 363 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 TRAPPC3LQ5T215 181 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 EFCC1Q9HA90 598 aa18.02■□□□□ 0.48
PNKP-204ENST00000594661 WDR33Q9C0J8 1336 aaKnown RBP18.02■□□□□ 0.48
PNKP-204ENST00000594661 TRIM37O94972 964 aa18.02■□□□□ 0.47
PNKP-204ENST00000594661 LARGE1O95461 756 aa18.02■□□□□ 0.47
PNKP-204ENST00000594661 CYP21A2P08686 494 aa18.02■□□□□ 0.47
PNKP-204ENST00000594661 PIH1D3Q9NQM4 214 aaKnown RBP18.02■□□□□ 0.47
PNKP-204ENST00000594661 USP25Q9UHP3 1055 aa18.02■□□□□ 0.47
PNKP-204ENST00000594661 A0A1B0GUL6 1792 aa18.02■□□□□ 0.47
PNKP-204ENST00000594661 MYO5AQ9Y4I1 1855 aaKnown RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 UQCRFS1P1P0C7P4 283 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 HSPD1P10809 573 aaKnown RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 LRRFIP1Q32MZ4 808 aaKnown RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 BRD2P25440 801 aaKnown RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 WASHC4Q2M389 1173 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 ZSCAN31Q96LW9 406 aaPredicted RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 TCEANC2Q96MN5 208 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 FEZ2Q9UHY8 353 aaPredicted RBP18.01■□□□□ 0.47
PNKP-204ENST00000594661 SMC3Q9UQE7 1217 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 UBR3Q6ZT12 1888 aa18.01■□□□□ 0.47
PNKP-204ENST00000594661 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
PNKP-204ENST00000594661 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
PNKP-204ENST00000594661 CELF1Q92879 486 aaKnown RBP18■□□□□ 0.47
PNKP-204ENST00000594661 GEMIN8Q9NWZ8 242 aaKnown RBP18■□□□□ 0.47
PNKP-204ENST00000594661 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 MPNDQ8N594 471 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 APPBP2Q92624 585 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
PNKP-204ENST00000594661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.99■□□□□ 0.47
PNKP-204ENST00000594661 A0A0G2JLW4 131 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 SMTNL1A8MU46 457 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 RASGRF1Q13972 1273 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 TPTE2Q6XPS3 522 aa17.99■□□□□ 0.47
PNKP-204ENST00000594661 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
PNKP-204ENST00000594661 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
PNKP-204ENST00000594661 WTIPA6NIX2 430 aaPredicted RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 FOXP2O15409 715 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 BCAMP50895 628 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 KRT32Q14532 448 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 TTF1Q15361 905 aaPredicted RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 FOXD4L6Q3SYB3 417 aaPredicted RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 FOXD4L3Q6VB84 417 aaPredicted RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 STOX1Q6ZVD7 989 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 SPATA5Q8NB90 893 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 NLRP3Q96P20 1036 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.472e-7■■■■■ 30.6
PNKP-204ENST00000594661 KCNF1Q9H3M0 494 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 BSDC1Q9NW68 430 aaPredicted RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 PYCARDQ9ULZ3 195 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
PNKP-204ENST00000594661 ADD2P35612 726 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 NFIXQ14938 502 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 ME3Q16798 604 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 CERS3Q8IU89 383 aa17.98■□□□□ 0.47
PNKP-204ENST00000594661 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 TPCN1Q9ULQ1 816 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 MINPP1Q9UNW1 487 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
PNKP-204ENST00000594661 STX6O43752 255 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 ADRA2BP18089 450 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 SYT1P21579 422 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 ST3GAL1Q11201 340 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 TOB2Q14106 344 aaPredicted RBP17.96■□□□□ 0.47
PNKP-204ENST00000594661 WWC3Q9ULE0 1092 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 GJB2P29033 226 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 TTLL5Q6EMB2 1281 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
PNKP-204ENST00000594661 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 DOCK2Q92608 1830 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 GPAA1O43292 621 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 KDM4AO75164 1064 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
PNKP-204ENST00000594661 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PNKP-204ENST00000594661 ANKRD1Q15327 319 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
PNKP-204ENST00000594661 TCHHQ07283 1943 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 PDE6AP16499 860 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 PROM2Q8N271 834 aa17.95■□□□□ 0.46
PNKP-204ENST00000594661 ZNF532Q9HCE3 1301 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms