RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NKX1-1Q15270 411 aaPredicted RBP19.17■□□□□ 0.66
LIG1-206ENST00000594067 DPCR1Q3MIW9 517 aa19.17■□□□□ 0.66
LIG1-206ENST00000594067 KCNG4Q8TDN1 519 aa19.17■□□□□ 0.66
LIG1-206ENST00000594067 KIAA1468Q9P260 1216 aa19.17■□□□□ 0.66
LIG1-206ENST00000594067 MORC2Q9Y6X9 1032 aaPredicted RBP19.17■□□□□ 0.66
LIG1-206ENST00000594067 IL2RBP14784 551 aa19.17■□□□□ 0.66
LIG1-206ENST00000594067 POLR3EQ9NVU0 708 aa19.17■□□□□ 0.66
LIG1-206ENST00000594067 BIN1O00499 593 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 YEATS4O95619 227 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 CCZ1BP86790 482 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 CCZ1P86791 482 aaPredicted RBP19.16■□□□□ 0.66
LIG1-206ENST00000594067 PTPN14Q15678 1187 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 ZRSR1Q15695 479 aaKnown RBP19.16■□□□□ 0.66
LIG1-206ENST00000594067 KIF18AQ8NI77 898 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 TRMT1Q9NXH9 659 aaKnown RBP19.16■□□□□ 0.66
LIG1-206ENST00000594067 DCCP43146 1447 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 PCCAP05165 728 aaPredicted RBP19.16■□□□□ 0.66
LIG1-206ENST00000594067 METTL24Q5JXM2 366 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 NKX2-3Q8TAU0 364 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 FBXO3Q9UK99 471 aa19.16■□□□□ 0.66
LIG1-206ENST00000594067 ZNF215Q9UL58 517 aaPredicted RBP19.16■□□□□ 0.66
LIG1-206ENST00000594067 UBR2Q8IWV8 1755 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 MCAMP43121 646 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 AIFM3Q96NN9 605 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 NEDD4P46934 1319 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 KIF23Q02241 960 aaPredicted RBP19.15■□□□□ 0.66
LIG1-206ENST00000594067 BRAPQ7Z569 592 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 DNAJC10Q8IXB1 793 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 STRN4Q9NRL3 753 aa19.15■□□□□ 0.66
LIG1-206ENST00000594067 CSF1RP07333 972 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 KIF6Q6ZMV9 814 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 ZNF202O95125 648 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 RXRAP19793 462 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 GPTP24298 496 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 ANO1Q5XXA6 986 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
LIG1-206ENST00000594067 NBPF3Q9H094 633 aa19.14■□□□□ 0.65
LIG1-206ENST00000594067 SLC3A2P08195 630 aaKnown RBP19.13■□□□□ 0.65
LIG1-206ENST00000594067 MARCKSP29966 332 aaPredicted RBP19.13■□□□□ 0.65
LIG1-206ENST00000594067 GABPB1Q06547 395 aaPredicted RBP19.13■□□□□ 0.65
LIG1-206ENST00000594067 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
LIG1-206ENST00000594067 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 LDHAL6AQ6ZMR3 332 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 TNS2Q63HR2 1409 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 SMC2O95347 1197 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 TMOD3Q9NYL9 352 aa19.13■□□□□ 0.65
LIG1-206ENST00000594067 PFKFB1P16118 471 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 TRDNQ13061 729 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 AXDND1Q5T1B0 1012 aaPredicted RBP19.12■□□□□ 0.65
LIG1-206ENST00000594067 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 CYB5R4Q7L1T6 521 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 TBC1D10CQ8IV04 446 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 CCAR2Q8N163 923 aaKnown RBP19.12■□□□□ 0.65
LIG1-206ENST00000594067 PLA2G12BQ9BX93 195 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.12■□□□□ 0.654e-7■■■■□ 20.3
LIG1-206ENST00000594067 GREM2Q9H772 168 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 KCND1Q9NSA2 647 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 RIPOR2Q9Y4F9 1068 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 STRCP1A6NGW2 1772 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 WDHD1O75717 1129 aaPredicted RBP19.12■□□□□ 0.65
LIG1-206ENST00000594067 APPP05067 770 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 ITGA6P23229 1130 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 ZNF397Q8NF99 534 aaPredicted RBP19.12■□□□□ 0.65
LIG1-206ENST00000594067 XPO4Q9C0E2 1151 aaKnown RBP19.12■□□□□ 0.65
LIG1-206ENST00000594067 IFNKQ9P0W0 207 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 ASAP1Q9ULH1 1129 aa19.12■□□□□ 0.65
LIG1-206ENST00000594067 SLFN14P0C7P3 912 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 ADD2P35612 726 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 HLFQ16534 295 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 BRINP3Q76B58 766 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 MROH7-TTC4A0A0A0MT08 1334 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 IDH1O75874 414 aaKnown RBP19.11■□□□□ 0.65
LIG1-206ENST00000594067 NLRP12P59046 1061 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 SENP2Q9HC62 589 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 PIH1D3Q9NQM4 214 aaKnown RBP19.11■□□□□ 0.65
LIG1-206ENST00000594067 CNNM1Q9NRU3 951 aa19.11■□□□□ 0.65
LIG1-206ENST00000594067 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.11■□□□□ 0.65
LIG1-206ENST00000594067 ANGEL1Q9UNK9 670 aaKnown RBP19.11■□□□□ 0.65
LIG1-206ENST00000594067 V9GYY5 206 aaPredicted RBP19.11■□□□□ 0.65
LIG1-206ENST00000594067 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
LIG1-206ENST00000594067 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
LIG1-206ENST00000594067 TMC6Q7Z403 805 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 CARD10Q9BWT7 1032 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 CMA1P23946 247 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 GSDMDP57764 484 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 ZNF771Q7L3S4 317 aaPredicted RBP19.1■□□□□ 0.65
LIG1-206ENST00000594067 TTLL11Q8NHH1 800 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 PHKBQ93100 1093 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 ZMYM6O95789 1325 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 PAPPAQ13219 1627 aa19.1■□□□□ 0.65
LIG1-206ENST00000594067 ERO1AQ96HE7 468 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 BPIFA3Q9BQP9 254 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 OSBPL5Q9H0X9 879 aaPredicted RBP19.09■□□□□ 0.65
LIG1-206ENST00000594067 WDR19Q8NEZ3 1342 aa19.09■□□□□ 0.65
LIG1-206ENST00000594067 ABCC12Q96J65 1359 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms