RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 FDX1P10109 184 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 EIF4A1P60842 406 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 PKN2Q16513 984 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 PARP10Q53GL7 1025 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 SPSB2Q99619 263 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 ZNF609O15014 1411 aa12.61□□□□□ -0.39
TUBD1-215ENST00000593110 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
TUBD1-215ENST00000593110 BBOX1O75936 387 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 MYL6BP14649 208 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 NDUFV2P19404 249 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 GRAPQ13588 217 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 GRAPLQ8TC17 118 aaPredicted RBP12.6□□□□□ -0.39
TUBD1-215ENST00000593110 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
TUBD1-215ENST00000593110 CDCA5Q96FF9 252 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
TUBD1-215ENST00000593110 PSME4Q14997 1843 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
TUBD1-215ENST00000593110 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
TUBD1-215ENST00000593110 GGCXP38435 758 aa12.59□□□□□ -0.39
TUBD1-215ENST00000593110 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
TUBD1-215ENST00000593110 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
TUBD1-215ENST00000593110 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
TUBD1-215ENST00000593110 DBNDD1Q9H9R9 158 aa12.59□□□□□ -0.39
TUBD1-215ENST00000593110 HCLS1P14317 486 aaPredicted RBP12.58□□□□□ -0.4
TUBD1-215ENST00000593110 KIF4BQ2VIQ3 1234 aa12.58□□□□□ -0.4
TUBD1-215ENST00000593110 NOM1Q5C9Z4 860 aaKnown RBP12.58□□□□□ -0.4
TUBD1-215ENST00000593110 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
TUBD1-215ENST00000593110 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
TUBD1-215ENST00000593110 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
TUBD1-215ENST00000593110 KCNQ5Q9NR82 932 aa12.58□□□□□ -0.4
TUBD1-215ENST00000593110 FXR1P51114 621 aaKnown RBP eCLIP12.57□□□□□ -0.4
TUBD1-215ENST00000593110 MYSM1Q5VVJ2 828 aa12.57□□□□□ -0.4
TUBD1-215ENST00000593110 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-215ENST00000593110 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
TUBD1-215ENST00000593110 ZNF646O15015 1829 aaPredicted RBP12.57□□□□□ -0.4
TUBD1-215ENST00000593110 ECE2O60344 883 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 RSBN1LQ6PCB5 846 aaPredicted RBP12.56□□□□□ -0.4
TUBD1-215ENST00000593110 NLRP10Q86W26 655 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 POLLQ9UGP5 575 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 LAMB1P07942 1786 aa12.56□□□□□ -0.4
TUBD1-215ENST00000593110 KIAA0100Q14667 2235 aaKnown RBP12.56□□□□□ -0.4
TUBD1-215ENST00000593110 GPR25O00155 361 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 GJA5P36382 358 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 ZNF280AP59817 542 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 FKBP1BP68106 108 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 WASHC4Q2M389 1173 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 PPP1R18Q6NYC8 613 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 MOB2Q70IA6 237 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
TUBD1-215ENST00000593110 CFHR5Q9BXR6 569 aa12.55□□□□□ -0.4
TUBD1-215ENST00000593110 RANBP2P49792 3224 aaKnown RBP12.54□□□□□ -0.4
TUBD1-215ENST00000593110 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 SPTLC1O15269 473 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 S1PR4O95977 384 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
TUBD1-215ENST00000593110 R3HDMLQ9H3Y0 253 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.54□□□□□ -0.4
TUBD1-215ENST00000593110 HDAC9Q9UKV0 1011 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
TUBD1-215ENST00000593110 ANXA1P04083 346 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 TM4SF4P48230 202 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 GPSM2P81274 684 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 ANGEL2Q5VTE6 544 aaKnown RBP12.53□□□□□ -0.4
TUBD1-215ENST00000593110 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
TUBD1-215ENST00000593110 CFAP53Q96M91 514 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 USB1Q9BQ65 265 aaKnown RBP12.53□□□□□ -0.4
TUBD1-215ENST00000593110 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 PITPNM2Q9BZ72 1349 aa12.53□□□□□ -0.4
TUBD1-215ENST00000593110 CEP290O15078 2479 aa12.52□□□□□ -0.4
TUBD1-215ENST00000593110 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
TUBD1-215ENST00000593110 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
TUBD1-215ENST00000593110 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
TUBD1-215ENST00000593110 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
TUBD1-215ENST00000593110 GMLQ99445 158 aa12.52□□□□□ -0.41
TUBD1-215ENST00000593110 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
TUBD1-215ENST00000593110 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
TUBD1-215ENST00000593110 SCARF1Q14162 830 aa12.51□□□□□ -0.41
TUBD1-215ENST00000593110 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
TUBD1-215ENST00000593110 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
TUBD1-215ENST00000593110 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
TUBD1-215ENST00000593110 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
TUBD1-215ENST00000593110 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
TUBD1-215ENST00000593110 PPP2R1AP30153 589 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms