RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MAP3K12Q12852 859 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 ILDR1Q86SU0 546 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 MARCH10Q8NA82 808 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 ANGEL1Q9UNK9 670 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 ZMYM6O95789 1325 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 DOCK2Q92608 1830 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 AP5Z1O43299 807 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 STRBPQ96SI9 672 aaKnown RBP19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 RTL9Q8NET4 1388 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
PRKCSH-217ENST00000592741 ITPK1Q13572 414 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 ALX1Q15699 326 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 CBX8Q9HC52 389 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 SEC31BQ9NQW1 1179 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 SH2B2O14492 632 aaPredicted RBP19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 CAVIN2O95810 425 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 TPM3P06753 285 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 ME1P48163 572 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 TERF1P54274 439 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 RASGRF1Q13972 1273 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 LUZP1Q86V48 1076 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRKCSH-217ENST00000592741 SPATA31A5Q5VU36 1347 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 SPATA31A7Q8IWB4 1347 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 GOLGA6L6A8MZA4 724 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 NTSR2O95665 410 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 CYB5R4Q7L1T6 521 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 MPNDQ8N594 471 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 FBXO18Q8NFZ0 1043 aa19.35■□□□□ 0.69
PRKCSH-217ENST00000592741 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 RGS22Q8NE09 1264 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 TMEM87BQ96K49 555 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 PATL2C9JE40 543 aaKnown RBP19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 KINO60870 393 aaKnown RBP19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 CDKL5O76039 1030 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 FAM160A1Q05DH4 1040 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 ZNF830Q96NB3 372 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 ZNF652Q9Y2D9 606 aa19.34■□□□□ 0.69
PRKCSH-217ENST00000592741 MBD4O95243 580 aa19.33■□□□□ 0.69
PRKCSH-217ENST00000592741 METAP2P50579 478 aaKnown RBP eCLIP19.33■□□□□ 0.691e-6■■□□□ 12.1
PRKCSH-217ENST00000592741 OTUD7BQ6GQQ9 843 aa19.33■□□□□ 0.69
PRKCSH-217ENST00000592741 FSIP1Q8NA03 581 aa19.33■□□□□ 0.69
PRKCSH-217ENST00000592741 TDRD7Q8NHU6 1098 aaKnown RBP19.33■□□□□ 0.69
PRKCSH-217ENST00000592741 NAPBQ9H115 298 aa19.33■□□□□ 0.69
PRKCSH-217ENST00000592741 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 B4E1Z4 1266 aa19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 CPLX2Q6PUV4 134 aaKnown RBP19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 PIBF1Q8WXW3 757 aa19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 TTC12Q9H892 705 aaPredicted RBP19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 DENND2AQ9ULE3 1009 aa19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 R3HCC1Q9Y3T6 440 aaKnown RBP19.33■□□□□ 0.68
PRKCSH-217ENST00000592741 NEDD4P46934 1319 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 SNAP23O00161 211 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 ZNF165P49910 485 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 IFNL3Q8IZI9 196 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
PRKCSH-217ENST00000592741 YEATS4O95619 227 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 STK38Q15208 465 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 ENGASEQ8NFI3 743 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 KCNG4Q8TDN1 519 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 MRPS27Q92552 414 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 EPB41L4AQ9HCS5 686 aaPredicted RBP19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 POLR3EQ9NVU0 708 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 TIAM2Q8IVF5 1701 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 A0A1W2PQ27 194 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 A0A1W2PQ64 194 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 A0A1W2PQD8 194 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 GNAT2P19087 354 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 STX1AQ16623 288 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 MYSM1Q5VVJ2 828 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 ADALQ6DHV7 355 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 APOA5Q6Q788 366 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 ARMT1Q9H993 441 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 PCDHA7Q9UN72 937 aa19.31■□□□□ 0.68
PRKCSH-217ENST00000592741 NUTM2BA6NNL0 878 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 NUTM2EB1AL46 878 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 BCAMP50895 628 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 CHRNDQ07001 517 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 NFXL1Q6ZNB6 911 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 NUTM2AQ8IVF1 878 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 LINC00301Q8NCQ3 95 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 CNNM2Q9H8M5 875 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 COL5A3P25940 1745 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 CHD4Q14839 1912 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 SPC24Q8NBT2 197 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 NKX2-3Q8TAU0 364 aa19.3■□□□□ 0.68
PRKCSH-217ENST00000592741 NACAP1Q9BZK3 213 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms