RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 CFAP47Q6ZTR5 3102 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 COL6A1P12109 1028 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 COL9A2Q14055 689 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 PRDM12Q9H4Q4 367 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 PRKAG2Q9UGJ0 569 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 DOCK3Q8IZD9 2030 aa11.93□□□□□ -0.5
SMARCA4-218ENST00000592158 ZNF318Q5VUA4 2279 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 IGFBP4P22692 258 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 PARP10Q53GL7 1025 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
SMARCA4-218ENST00000592158 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 UFL1O94874 794 aa11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 VGLL4Q14135 290 aa11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 ZBED3Q96IU2 234 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 HMX1Q9NP08 348 aaPredicted RBP11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
SMARCA4-218ENST00000592158 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 GFRA3O60609 400 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 COL4A1P02462 1669 aa11.9□□□□□ -0.5
SMARCA4-218ENST00000592158 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
SMARCA4-218ENST00000592158 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
SMARCA4-218ENST00000592158 SNAPC2Q13487 334 aa11.89□□□□□ -0.51
SMARCA4-218ENST00000592158 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
SMARCA4-218ENST00000592158 RNPC3Q96LT9 517 aaKnown RBP11.89□□□□□ -0.51
SMARCA4-218ENST00000592158 MYO3BQ8WXR4 1341 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 PDHXO00330 501 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 HMOX1P09601 288 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 BCRP11274 1271 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 IL13P35225 146 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 MMP14P50281 582 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 MAP3K9P80192 1104 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 CSADQ9Y600 493 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
SMARCA4-218ENST00000592158 TNPO2O14787 897 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-218ENST00000592158 IRF6O14896 467 aa11.87□□□□□ -0.51
SMARCA4-218ENST00000592158 TLL1O43897 1013 aa11.87□□□□□ -0.51
SMARCA4-218ENST00000592158 BADQ92934 168 aa11.87□□□□□ -0.51
SMARCA4-218ENST00000592158 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
SMARCA4-218ENST00000592158 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 ERC2O15083 957 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 HMGCRP04035 888 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 TRIM32Q13049 653 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 ANKRD23Q86SG2 305 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
SMARCA4-218ENST00000592158 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 RASA3Q14644 834 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 CHD7Q9P2D1 2997 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
SMARCA4-218ENST00000592158 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
SMARCA4-218ENST00000592158 ERO1BQ86YB8 467 aa11.84□□□□□ -0.51
SMARCA4-218ENST00000592158 ANKS1AQ92625 1134 aa11.84□□□□□ -0.51
SMARCA4-218ENST00000592158 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-218ENST00000592158 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.51
SMARCA4-218ENST00000592158 ID4P47928 161 aa11.83□□□□□ -0.52
SMARCA4-218ENST00000592158 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
SMARCA4-218ENST00000592158 PARK7Q99497 189 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-218ENST00000592158 SENP6Q9GZR1 1112 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-218ENST00000592158 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
SMARCA4-218ENST00000592158 CEMIPQ8WUJ3 1361 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 SETXQ7Z333 2677 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 MYL6BP14649 208 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 PPIL2Q13356 520 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 CNTNAP3BQ96NU0 1288 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 CNTNAP3Q9BZ76 1288 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 PRDM5Q9NQX1 630 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 IGSF5Q9NSI5 407 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 KCNH4Q9UQ05 1017 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 SNCAIPQ9Y6H5 919 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
SMARCA4-218ENST00000592158 FASNP49327 2511 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-218ENST00000592158 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-218ENST00000592158 MYO1BO43795 1136 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 846.8 ms