RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GSCP56915 257 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 PSME1Q06323 249 aa17.43■□□□□ 0.38
CIRBP-228ENST00000590347 RUFY2Q8WXA3 655 aa17.43■□□□□ 0.38
CIRBP-228ENST00000590347 CTAGE5O15320 804 aa17.43■□□□□ 0.38
CIRBP-228ENST00000590347 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
CIRBP-228ENST00000590347 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 MARCKSP29966 332 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 BAG1Q99933 345 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-228ENST00000590347 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
CIRBP-228ENST00000590347 A0A087WUV0 522 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-228ENST00000590347 ZSCAN12O43309 604 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 PPFIA4O75335 1185 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 EIF3JO75822 258 aaKnown RBP17.42■□□□□ 0.38
CIRBP-228ENST00000590347 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
CIRBP-228ENST00000590347 NOA1Q8NC60 698 aaKnown RBP17.42■□□□□ 0.38
CIRBP-228ENST00000590347 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 FAM169AQ9Y6X4 670 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-228ENST00000590347 SOWAHDA6NJG2 315 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 SCRN1Q12765 414 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 CLIC4Q9Y696 253 aa17.42■□□□□ 0.38
CIRBP-228ENST00000590347 H0YHG0 523 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 CAPN7Q9Y6W3 813 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 SKAP2O75563 359 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 ZNF569Q5MCW4 686 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 CUTAO60888 179 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 NEBLO76041 1014 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 PAX7P23759 505 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 MRPS25P82663 173 aaKnown RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 ACTN3Q08043 901 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 AACSQ86V21 672 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 FMR1NBQ8N0W7 255 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-228ENST00000590347 RNF217Q8TC41 542 aa17.41■□□□□ 0.38
CIRBP-228ENST00000590347 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
CIRBP-228ENST00000590347 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 AFAP1L1Q8TED9 768 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 CDC5LQ99459 802 aaKnown RBP17.4■□□□□ 0.38
CIRBP-228ENST00000590347 HSD3B7Q9H2F3 369 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
CIRBP-228ENST00000590347 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 CCDC189A1A4V9 331 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 PSMA5P28066 241 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 BRD3Q15059 726 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 STK38Q15208 465 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 NCAPH2Q6IBW4 605 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 GBP6Q6ZN66 633 aa17.4■□□□□ 0.38
CIRBP-228ENST00000590347 ANKRD26Q9UPS8 1709 aa17.39■□□□□ 0.38
CIRBP-228ENST00000590347 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-228ENST00000590347 TMEM139Q8IV31 216 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 GIMAP7Q8NHV1 300 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-228ENST00000590347 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 GOLIM4O00461 696 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
CIRBP-228ENST00000590347 SSBP05455 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
CIRBP-228ENST00000590347 BIRC2Q13490 618 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 NAIF1Q69YI7 327 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-228ENST00000590347 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.37
CIRBP-228ENST00000590347 SATB1Q01826 763 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 SWT1Q5T5J6 900 aaKnown RBP17.38■□□□□ 0.37
CIRBP-228ENST00000590347 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
CIRBP-228ENST00000590347 SGSM3Q96HU1 749 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 KAT14Q9H8E8 782 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 INTS13Q9NVM9 706 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 PNOCQ13519 176 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 LRCH2Q5VUJ6 765 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 ILDR1Q86SU0 546 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-228ENST00000590347 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 CCP110O43303 1012 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 ZNF827Q17R98 1081 aa17.38■□□□□ 0.37
CIRBP-228ENST00000590347 A0A0G2JLW4 131 aa17.37■□□□□ 0.37
CIRBP-228ENST00000590347 HOXC9P31274 260 aa17.37■□□□□ 0.37
CIRBP-228ENST00000590347 EGFL6Q8IUX8 553 aa17.37■□□□□ 0.37
CIRBP-228ENST00000590347 MAP4K1Q92918 833 aa17.37■□□□□ 0.37
CIRBP-228ENST00000590347 ERLIN1O75477 346 aa17.37■□□□□ 0.37
CIRBP-228ENST00000590347 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
CIRBP-228ENST00000590347 N4BP2L2Q92802 583 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-228ENST00000590347 ARHGAP6O43182 974 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 ZNF202O95125 648 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 BCAS4Q8TDM0 211 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 INPP5BP32019 993 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 SPECC1Q5M775 1068 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
CIRBP-228ENST00000590347 FAM71BQ8TC56 605 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms