RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 COL11A2P13942 1736 aaPredicted RBP11.91□□□□□ -0.5
RANBP3-216ENST00000589353 ZMYM6O95789 1325 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 ZNF213O14771 459 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 MBD4O95243 580 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 CHRNA5P30532 468 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 RUFY3Q7L099 469 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 RTKN2Q8IZC4 609 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 ZSCAN31Q96LW9 406 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-216ENST00000589353 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-216ENST00000589353 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 SUGT1Q9Y2Z0 365 aa11.9□□□□□ -0.5
RANBP3-216ENST00000589353 FAM205AQ6ZU69 1335 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 BAG3O95817 575 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 CHGBP05060 677 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 TRDNQ13061 729 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 CCDC93Q567U6 631 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 NSUN4Q96CB9 384 aaKnown RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 CHMP4CQ96CF2 233 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 NAPBQ9H115 298 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 SLC4A4Q9Y6R1 1079 aa11.89□□□□□ -0.51
RANBP3-216ENST00000589353 COL1A1P02452 1464 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-216ENST00000589353 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 FGAP02671 866 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 CYP21A2P08686 494 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 PLCG2P16885 1265 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 MECOMQ03112 1051 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 GIMAP6Q6P9H5 292 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 CRNKL1Q9BZJ0 848 aaKnown RBP11.88□□□□□ -0.51
RANBP3-216ENST00000589353 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
RANBP3-216ENST00000589353 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
RANBP3-216ENST00000589353 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 DPEP1P16444 411 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 TDO2P48775 406 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 FGD1P98174 961 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 MFSD14BQ5SR56 506 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
RANBP3-216ENST00000589353 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 C7orf43Q8WVR3 580 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 GPR101Q96P66 508 aaPredicted RBP11.87□□□□□ -0.51
RANBP3-216ENST00000589353 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
RANBP3-216ENST00000589353 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
RANBP3-216ENST00000589353 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 SLX4Q8IY92 1834 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
RANBP3-216ENST00000589353 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 E7EWF7 191 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 PRDX5P30044 214 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 FKBP1AP62942 108 aaKnown RBP11.86□□□□□ -0.51
RANBP3-216ENST00000589353 GTF2IP78347 998 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 ADCK5Q3MIX3 580 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
RANBP3-216ENST00000589353 AMOTL1Q8IY63 956 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 NCOA7Q8NI08 942 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
RANBP3-216ENST00000589353 TTC14Q96N46 770 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 PSMD1Q99460 953 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
RANBP3-216ENST00000589353 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 ATP8A2Q9NTI2 1148 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
RANBP3-216ENST00000589353 ZNF219Q9P2Y4 722 aaPredicted RBP11.86□□□□□ -0.51
RANBP3-216ENST00000589353 GSG1L2A8MUP6 293 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 C21orf2O43822 256 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
RANBP3-216ENST00000589353 SLC3A2P08195 630 aaKnown RBP11.85□□□□□ -0.51
RANBP3-216ENST00000589353 AK2P54819 239 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
RANBP3-216ENST00000589353 LCORLQ8N3X6 602 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
RANBP3-216ENST00000589353 TMX3Q96JJ7 454 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 KRT23Q9C075 422 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
RANBP3-216ENST00000589353 WDR19Q8NEZ3 1342 aa11.85□□□□□ -0.51
RANBP3-216ENST00000589353 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
RANBP3-216ENST00000589353 PCP11498 1178 aaKnown RBP11.84□□□□□ -0.51
RANBP3-216ENST00000589353 MCM5P33992 734 aa11.84□□□□□ -0.51
RANBP3-216ENST00000589353 NT5C2P49902 561 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms