RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 C7orf69Q9H7B7 122 aa8□□□□□ -1.13
VMP1-205ENST00000587470 HMX2A2RU54 273 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 DLGAP3O95886 979 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 CYP11A1P05108 521 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 ITPKAP23677 461 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 PTPN12Q05209 780 aaKnown RBP7.99□□□□□ -1.13
VMP1-205ENST00000587470 NFIAQ12857 509 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 RNF43Q68DV7 783 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
VMP1-205ENST00000587470 NRSN2Q9GZP1 204 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 KCNF1Q9H3M0 494 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
VMP1-205ENST00000587470 KIAA1324LA8MWY0 1029 aaPredicted RBP7.98□□□□□ -1.13
VMP1-205ENST00000587470 GAS2O43903 313 aaKnown RBP7.98□□□□□ -1.13
VMP1-205ENST00000587470 GADD45BO75293 160 aaPredicted RBP7.98□□□□□ -1.13
VMP1-205ENST00000587470 TIAF1O95411 115 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 MCTP1Q6DN14 999 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 BEND4Q6ZU67 534 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 TMC7Q7Z402 723 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 ZNF576Q9H609 170 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 ZFYVE1Q9HBF4 777 aa7.98□□□□□ -1.13
VMP1-205ENST00000587470 B3GALT4O96024 378 aa7.97□□□□□ -1.13
VMP1-205ENST00000587470 SSTR4P31391 388 aa7.97□□□□□ -1.13
VMP1-205ENST00000587470 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
VMP1-205ENST00000587470 DBNDD2Q9BQY9 259 aa7.97□□□□□ -1.13
VMP1-205ENST00000587470 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
VMP1-205ENST00000587470 COL17A1Q9UMD9 1497 aaPredicted RBP7.96□□□□□ -1.13
VMP1-205ENST00000587470 MAOBP27338 520 aa7.96□□□□□ -1.14
VMP1-205ENST00000587470 MAP4P27816 1152 aaKnown RBP7.96□□□□□ -1.14
VMP1-205ENST00000587470 POU4F3Q15319 338 aa7.96□□□□□ -1.14
VMP1-205ENST00000587470 HP1BP3Q5SSJ5 553 aaPredicted RBP7.96□□□□□ -1.14
VMP1-205ENST00000587470 ZDHHC13Q8IUH4 622 aa7.96□□□□□ -1.14
VMP1-205ENST00000587470 ABCB6Q9NP58 842 aa7.96□□□□□ -1.14
VMP1-205ENST00000587470 PCMTD2Q9NV79 361 aa7.96□□□□□ -1.14
VMP1-205ENST00000587470 TMEM238LA0A1B0GVL6 79 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 ADAMTS4O75173 837 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 TGFB1P01137 390 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 PLCB3Q01970 1234 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 RPS26P11Q5JNZ5 115 aaPredicted RBP7.95□□□□□ -1.14
VMP1-205ENST00000587470 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
VMP1-205ENST00000587470 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 PPP4R2Q9NY27 417 aa7.95□□□□□ -1.14
VMP1-205ENST00000587470 DRD2P14416 443 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 MAPK1P28482 360 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 USP11P51784 963 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 SOX4Q06945 474 aaPredicted RBP7.94□□□□□ -1.14
VMP1-205ENST00000587470 GRM2Q14416 872 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 DSC3Q14574 896 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 SGO2Q562F6 1265 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 GLIS3Q8NEA6 775 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
VMP1-205ENST00000587470 TRIM56Q9BRZ2 755 aaKnown RBP7.94□□□□□ -1.14
VMP1-205ENST00000587470 PRR19A6NJB7 356 aa7.93□□□□□ -1.14
VMP1-205ENST00000587470 COBLO75128 1261 aa7.93□□□□□ -1.14
VMP1-205ENST00000587470 SPINK2P20155 84 aa7.93□□□□□ -1.14
VMP1-205ENST00000587470 RXRBP28702 533 aa7.93□□□□□ -1.14
VMP1-205ENST00000587470 KCNA1Q09470 495 aa7.93□□□□□ -1.14
VMP1-205ENST00000587470 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
VMP1-205ENST00000587470 TREHO43280 583 aa7.92□□□□□ -1.14
VMP1-205ENST00000587470 CTSBP07858 339 aa7.92□□□□□ -1.14
VMP1-205ENST00000587470 AP3B2Q13367 1082 aa7.92□□□□□ -1.14
VMP1-205ENST00000587470 GOLGA2P5Q9HBQ8 144 aa7.92□□□□□ -1.14
VMP1-205ENST00000587470 IVNS1ABPQ9Y6Y0 642 aa7.92□□□□□ -1.14
VMP1-205ENST00000587470 FAM95CA0A1B0GW59 222 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 ADH5P11766 374 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 CDPF1Q6NVV7 123 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 INTS5Q6P9B9 1019 aaKnown RBP7.91□□□□□ -1.14
VMP1-205ENST00000587470 DTHD1Q6ZMT9 781 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 ZSCAN29Q8IWY8 852 aaPredicted RBP7.91□□□□□ -1.14
VMP1-205ENST00000587470 GIMAP7Q8NHV1 300 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 SHKBP1Q8TBC3 707 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 YIPF2Q9BWQ6 316 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 RAD18Q9NS91 495 aa7.91□□□□□ -1.14
VMP1-205ENST00000587470 OAS3Q9Y6K5 1087 aaKnown RBP7.91□□□□□ -1.14
VMP1-205ENST00000587470 ECEL1O95672 775 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 XRCC5P13010 732 aaKnown RBP7.9□□□□□ -1.14
VMP1-205ENST00000587470 GRIK1P39086 918 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 NFKBIBQ15653 356 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 ENOX2Q16206 610 aaKnown RBP7.9□□□□□ -1.14
VMP1-205ENST00000587470 PAOXQ6QHF9 649 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 FBLIM1Q8WUP2 373 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 EZH1Q92800 747 aaPredicted RBP7.9□□□□□ -1.14
VMP1-205ENST00000587470 MFSD14AQ96MC6 490 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 TRAIPQ9BWF2 469 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 BCO2Q9BYV7 579 aa7.9□□□□□ -1.14
VMP1-205ENST00000587470 SYNGAP1Q96PV0 1343 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 WDR64B1ANS9 1081 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 FCGRTP55899 365 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 FAAP100Q0VG06 881 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 AKAP4Q5JQC9 854 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 PI16Q6UXB8 463 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 FMNL2Q96PY5 1086 aa7.89□□□□□ -1.15
VMP1-205ENST00000587470 AOC2O75106 756 aa7.88□□□□□ -1.15
VMP1-205ENST00000587470 ZNF157P51786 506 aaPredicted RBP7.88□□□□□ -1.15
VMP1-205ENST00000587470 PDE3AQ14432 1141 aa7.88□□□□□ -1.15
VMP1-205ENST00000587470 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.88□□□□□ -1.15
VMP1-205ENST00000587470 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
VMP1-205ENST00000587470 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
VMP1-205ENST00000587470 ACTL7BQ9Y614 415 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms