RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
UBBP4-202ENST00000584755 CYP7A1P22680 504 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 MECOMQ03112 1051 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 KRT32Q14532 448 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 ALX1Q15699 326 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 ADGRA1Q86SQ6 560 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 TTC14Q96N46 770 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
UBBP4-202ENST00000584755 MBD4O95243 580 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 FGAP02671 866 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 GNAT2P19087 354 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 PRDX5P30044 214 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 MCM2P49736 904 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 NAA16Q6N069 864 aaPredicted RBP16.7■□□□□ 0.26
UBBP4-202ENST00000584755 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
UBBP4-202ENST00000584755 CHD4Q14839 1912 aa16.7■□□□□ 0.26
UBBP4-202ENST00000584755 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
UBBP4-202ENST00000584755 PSMA5P28066 241 aa16.69■□□□□ 0.26
UBBP4-202ENST00000584755 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
UBBP4-202ENST00000584755 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
UBBP4-202ENST00000584755 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
UBBP4-202ENST00000584755 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
UBBP4-202ENST00000584755 LDHBP07195 334 aaKnown RBP16.68■□□□□ 0.26
UBBP4-202ENST00000584755 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
UBBP4-202ENST00000584755 PTGER2P43116 358 aa16.68■□□□□ 0.26
UBBP4-202ENST00000584755 LCORLQ8N3X6 602 aa16.68■□□□□ 0.26
UBBP4-202ENST00000584755 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
UBBP4-202ENST00000584755 BRCA1P38398 1863 aaKnown RBP16.68■□□□□ 0.26
UBBP4-202ENST00000584755 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
UBBP4-202ENST00000584755 GSG1L2A8MUP6 293 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
UBBP4-202ENST00000584755 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 MAGEB6P1A0A0J9YX57 407 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 GRIK5Q16478 980 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
UBBP4-202ENST00000584755 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 MIGA1Q8NAN2 632 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 PSMD1Q99460 953 aa16.67■□□□□ 0.26
UBBP4-202ENST00000584755 EPB41L4AQ9HCS5 686 aaPredicted RBP16.67■□□□□ 0.26
UBBP4-202ENST00000584755 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
UBBP4-202ENST00000584755 C21orf2O43822 256 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 GSTO1P78417 241 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
UBBP4-202ENST00000584755 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 IFNL3Q8IZI9 196 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
UBBP4-202ENST00000584755 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
UBBP4-202ENST00000584755 E7EWF7 191 aa16.65■□□□□ 0.26
UBBP4-202ENST00000584755 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
UBBP4-202ENST00000584755 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
UBBP4-202ENST00000584755 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
UBBP4-202ENST00000584755 BLOC1S2Q6QNY1 142 aa16.65■□□□□ 0.26
UBBP4-202ENST00000584755 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
UBBP4-202ENST00000584755 PRKAB2O43741 272 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
UBBP4-202ENST00000584755 CPA1P15085 419 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 PPP4CP60510 307 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
UBBP4-202ENST00000584755 GTF2IP78347 998 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
UBBP4-202ENST00000584755 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
UBBP4-202ENST00000584755 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 TIAM2Q8IVF5 1701 aa16.64■□□□□ 0.25
UBBP4-202ENST00000584755 ZNF213O14771 459 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 LDHCP07864 332 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 AK2P54819 239 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 FKBP1AP62942 108 aaKnown RBP16.63■□□□□ 0.25
UBBP4-202ENST00000584755 CERS3Q8IU89 383 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 TMX3Q96JJ7 454 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 NACAP1Q9BZK3 213 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 NBPF3Q9H094 633 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 GAKO14976 1311 aa16.63■□□□□ 0.25
UBBP4-202ENST00000584755 APPP05067 770 aa16.62■□□□□ 0.25
UBBP4-202ENST00000584755 DDIT3P35638 169 aa16.62■□□□□ 0.25
UBBP4-202ENST00000584755 CUL4AQ13619 759 aa16.62■□□□□ 0.25
UBBP4-202ENST00000584755 NAPBQ9H115 298 aa16.62■□□□□ 0.25
UBBP4-202ENST00000584755 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 ECE2O60344 883 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 EXOSC10Q01780 885 aaKnown RBP16.61■□□□□ 0.25
UBBP4-202ENST00000584755 DIXDC1Q155Q3 683 aa16.61■□□□□ 0.25
UBBP4-202ENST00000584755 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
UBBP4-202ENST00000584755 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms