RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 GYG1P46976 350 aa13.66□□□□□ -0.22
PGAP3-209ENST00000584620 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
PGAP3-209ENST00000584620 MAP3K11Q16584 847 aa13.66□□□□□ -0.22
PGAP3-209ENST00000584620 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
PGAP3-209ENST00000584620 NBPF11Q86T75 865 aa13.66□□□□□ -0.22
PGAP3-209ENST00000584620 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
PGAP3-209ENST00000584620 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
PGAP3-209ENST00000584620 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
PGAP3-209ENST00000584620 HIBADHP31937 336 aaKnown RBP13.65□□□□□ -0.22
PGAP3-209ENST00000584620 SH3TC2Q8TF17 1288 aa13.65□□□□□ -0.22
PGAP3-209ENST00000584620 PPP2R3BQ9Y5P8 575 aa13.65□□□□□ -0.22
PGAP3-209ENST00000584620 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-209ENST00000584620 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-209ENST00000584620 GJA5P36382 358 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 GRIK5Q16478 980 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 MFSD14BQ5SR56 506 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
PGAP3-209ENST00000584620 OTUD7BQ6GQQ9 843 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 SSH1Q8WYL5 1049 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 PTPN18Q99952 460 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
PGAP3-209ENST00000584620 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 MYO1BO43795 1136 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
PGAP3-209ENST00000584620 RASA3Q14644 834 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 USP44Q9H0E7 712 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 MROH5Q6ZUA9 1318 aa13.63□□□□□ -0.23
PGAP3-209ENST00000584620 E9PSI1 815 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
PGAP3-209ENST00000584620 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
PGAP3-209ENST00000584620 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
PGAP3-209ENST00000584620 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 PRO3102Q9H379 93 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 ZNF70Q9UC06 446 aaPredicted RBP13.62□□□□□ -0.23
PGAP3-209ENST00000584620 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
PGAP3-209ENST00000584620 PTPRCP08575 1304 aa13.62□□□□□ -0.23
PGAP3-209ENST00000584620 CUL9Q8IWT3 2517 aa13.61□□□□□ -0.23
PGAP3-209ENST00000584620 UNCXA6NJT0 531 aa13.61□□□□□ -0.23
PGAP3-209ENST00000584620 DZIP1LQ8IYY4 767 aaKnown RBP13.61□□□□□ -0.23
PGAP3-209ENST00000584620 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
PGAP3-209ENST00000584620 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
PGAP3-209ENST00000584620 TDRD3Q9H7E2 651 aaKnown RBP13.61□□□□□ -0.23
PGAP3-209ENST00000584620 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
PGAP3-209ENST00000584620 COL6A3P12111 3177 aa13.61□□□□□ -0.23
PGAP3-209ENST00000584620 ECM2O94769 699 aaPredicted RBP13.6□□□□□ -0.23
PGAP3-209ENST00000584620 PDE8BO95263 885 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 CRKP46108 304 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 ARHGAP39Q9C0H5 1083 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 A0A0C4DFX4 3053 aa13.6□□□□□ -0.23
PGAP3-209ENST00000584620 FGFR2P21802 821 aa13.59□□□□□ -0.23
PGAP3-209ENST00000584620 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
PGAP3-209ENST00000584620 BCAMP50895 628 aa13.59□□□□□ -0.23
PGAP3-209ENST00000584620 MTFR1Q15390 333 aa13.59□□□□□ -0.23
PGAP3-209ENST00000584620 LAMB1P07942 1786 aa13.58□□□□□ -0.23
PGAP3-209ENST00000584620 ZSWIM8A7E2V4 1837 aa13.58□□□□□ -0.24
PGAP3-209ENST00000584620 TESPA1A2RU30 521 aaPredicted RBP13.58□□□□□ -0.24
PGAP3-209ENST00000584620 IREB2P48200 963 aaKnown RBP13.58□□□□□ -0.24
PGAP3-209ENST00000584620 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
PGAP3-209ENST00000584620 ARHGEF6Q15052 776 aa13.58□□□□□ -0.24
PGAP3-209ENST00000584620 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
PGAP3-209ENST00000584620 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
PGAP3-209ENST00000584620 TMEM39BQ9GZU3 492 aa13.58□□□□□ -0.24
PGAP3-209ENST00000584620 RANBP2P49792 3224 aaKnown RBP13.57□□□□□ -0.24
PGAP3-209ENST00000584620 TCP10L2B9ZVM9 353 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 TNFAIP1Q13829 316 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
PGAP3-209ENST00000584620 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.57□□□□□ -0.24
PGAP3-209ENST00000584620 VPS37DQ86XT2 251 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 COL25A1Q9BXS0 654 aaPredicted RBP13.57□□□□□ -0.24
PGAP3-209ENST00000584620 ELP3Q9H9T3 547 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 ZFYVE28Q9HCC9 887 aa13.57□□□□□ -0.24
PGAP3-209ENST00000584620 CACNB3P54284 484 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
PGAP3-209ENST00000584620 PUM3Q15397 648 aaKnown RBP13.56□□□□□ -0.24
PGAP3-209ENST00000584620 APOBEC3HQ6NTF7 200 aaKnown RBP13.56□□□□□ -0.24
PGAP3-209ENST00000584620 TBC1D22AQ8WUA7 517 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 MRIQ9BWK5 157 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 NR2E3Q9Y5X4 410 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
PGAP3-209ENST00000584620 EYA2O00167 538 aa13.55□□□□□ -0.24
PGAP3-209ENST00000584620 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
PGAP3-209ENST00000584620 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
PGAP3-209ENST00000584620 ATG9AQ7Z3C6 839 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms