RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ZAP70P43403 619 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 FMR1Q06787 632 aaKnown RBP eCLIP20.11■□□□□ 0.81
RNF43-206ENST00000582293 DLK2Q6UY11 383 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 CNTROBQ8N137 903 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 PRMT6Q96LA8 375 aaPredicted RBP20.11■□□□□ 0.81
RNF43-206ENST00000582293 GGA3Q9NZ52 723 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 SERPINA10Q9UK55 444 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 ECM29Q5VYK3 1845 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 MYO5AQ9Y4I1 1855 aaKnown RBP20.1■□□□□ 0.81
RNF43-206ENST00000582293 SPDYE2BA6NHP3 402 aa20.1■□□□□ 0.81
RNF43-206ENST00000582293 SPDYE6P0CI01 402 aa20.1■□□□□ 0.81
RNF43-206ENST00000582293 CRKP46108 304 aa20.1■□□□□ 0.81
RNF43-206ENST00000582293 OTUD7AQ8TE49 926 aaPredicted RBP20.1■□□□□ 0.81
RNF43-206ENST00000582293 MRIQ9BWK5 157 aa20.1■□□□□ 0.81
RNF43-206ENST00000582293 RWDD1Q9H446 243 aaPredicted RBP20.1■□□□□ 0.81
RNF43-206ENST00000582293 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
RNF43-206ENST00000582293 SALL3Q9BXA9 1300 aa20.09■□□□□ 0.81
RNF43-206ENST00000582293 HDLBPQ00341 1268 aaKnown RBP20.09■□□□□ 0.81
RNF43-206ENST00000582293 DLGAP5Q15398 846 aa20.09■□□□□ 0.81
RNF43-206ENST00000582293 DIXDC1Q155Q3 683 aa20.09■□□□□ 0.81
RNF43-206ENST00000582293 ANGEL2Q5VTE6 544 aaKnown RBP20.09■□□□□ 0.81
RNF43-206ENST00000582293 GLIS2Q9BZE0 524 aaPredicted RBP20.09■□□□□ 0.81
RNF43-206ENST00000582293 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
RNF43-206ENST00000582293 ABCF2Q9UG63 623 aa20.09■□□□□ 0.81
RNF43-206ENST00000582293 SCAF8Q9UPN6 1271 aaKnown RBP20.09■□□□□ 0.81
RNF43-206ENST00000582293 TRAF5O00463 557 aa20.08■□□□□ 0.81
RNF43-206ENST00000582293 LDHBP07195 334 aaKnown RBP20.08■□□□□ 0.81
RNF43-206ENST00000582293 ANTXR1Q9H6X2 564 aa20.08■□□□□ 0.81
RNF43-206ENST00000582293 DOCK2Q92608 1830 aa20.07■□□□□ 0.8
RNF43-206ENST00000582293 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
RNF43-206ENST00000582293 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
RNF43-206ENST00000582293 APOBEC3HQ6NTF7 200 aaKnown RBP20.07■□□□□ 0.8
RNF43-206ENST00000582293 ZGPATQ8N5A5 531 aaKnown RBP20.07■□□□□ 0.8
RNF43-206ENST00000582293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.07■□□□□ 0.8
RNF43-206ENST00000582293 ZDHHC15Q96MV8 337 aa20.07■□□□□ 0.8
RNF43-206ENST00000582293 DAGLAQ9Y4D2 1042 aa20.07■□□□□ 0.8
RNF43-206ENST00000582293 MAST3O60307 1309 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 PITPNM2Q9BZ72 1349 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
RNF43-206ENST00000582293 ATP5JP18859 108 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 TSHZ3Q63HK5 1081 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 HHIPL2Q6UWX4 724 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 USP48Q86UV5 1035 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 TEKT1Q969V4 418 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 MAST2Q6P0Q8 1798 aa20.06■□□□□ 0.8
RNF43-206ENST00000582293 GAKO14976 1311 aa20.05■□□□□ 0.8
RNF43-206ENST00000582293 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
RNF43-206ENST00000582293 MECOMQ03112 1051 aa20.05■□□□□ 0.8
RNF43-206ENST00000582293 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
RNF43-206ENST00000582293 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
RNF43-206ENST00000582293 NSUN4Q96CB9 384 aaKnown RBP20.05■□□□□ 0.8
RNF43-206ENST00000582293 EDC3Q96F86 508 aaKnown RBP20.05■□□□□ 0.8
RNF43-206ENST00000582293 TDRD3Q9H7E2 651 aaKnown RBP20.05■□□□□ 0.8
RNF43-206ENST00000582293 MYH2Q9UKX2 1941 aa20.05■□□□□ 0.8
RNF43-206ENST00000582293 CLRN2A0PK11 232 aa20.04■□□□□ 0.8
RNF43-206ENST00000582293 SPDYE2Q495Y8 402 aa20.04■□□□□ 0.8
RNF43-206ENST00000582293 KRT26Q7Z3Y9 468 aa20.04■□□□□ 0.8
RNF43-206ENST00000582293 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
RNF43-206ENST00000582293 FAM163AQ96GL9 167 aaPredicted RBP20.04■□□□□ 0.8
RNF43-206ENST00000582293 BOLA2Q9H3K6 86 aa20.04■□□□□ 0.8
RNF43-206ENST00000582293 ECHDC1Q9NTX5 307 aa20.04■□□□□ 0.8
RNF43-206ENST00000582293 ZNF70Q9UC06 446 aaPredicted RBP20.04■□□□□ 0.8
RNF43-206ENST00000582293 SPTY2D1Q68D10 685 aaPredicted RBP20.03■□□□□ 0.8
RNF43-206ENST00000582293 B4GALNT3Q6L9W6 998 aa20.03■□□□□ 0.8
RNF43-206ENST00000582293 HAUS7Q99871 368 aa20.03■□□□□ 0.8
RNF43-206ENST00000582293 HSPA6P17066 643 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 NUCB1Q02818 461 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 CST9Q5W186 159 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 ADGRA1Q86SQ6 560 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 DZIP1Q86YF9 867 aaKnown RBP20.02■□□□□ 0.8
RNF43-206ENST00000582293 PI4K2BQ8TCG2 481 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 LNPKQ9C0E8 428 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 RAI14Q9P0K7 980 aa20.02■□□□□ 0.8
RNF43-206ENST00000582293 MROH7-TTC4A0A0A0MT08 1334 aa20.02■□□□□ 0.79
RNF43-206ENST00000582293 TRPM7Q96QT4 1865 aa20.01■□□□□ 0.79
RNF43-206ENST00000582293 APLP1P51693 650 aa20.01■□□□□ 0.79
RNF43-206ENST00000582293 DNAJC2Q99543 621 aaKnown RBP20.01■□□□□ 0.79
RNF43-206ENST00000582293 LRP2BPQ9P2M1 347 aa20.01■□□□□ 0.79
RNF43-206ENST00000582293 GOLIM4O00461 696 aa20■□□□□ 0.79
RNF43-206ENST00000582293 CACNB3P54284 484 aa20■□□□□ 0.79
RNF43-206ENST00000582293 HTRA3P83110 453 aa20■□□□□ 0.79
RNF43-206ENST00000582293 PRAMEF18Q5VWM3 479 aa20■□□□□ 0.79
RNF43-206ENST00000582293 CDC42EP5Q6NZY7 148 aa20■□□□□ 0.79
RNF43-206ENST00000582293 CHD1LQ86WJ1 897 aa20■□□□□ 0.79
RNF43-206ENST00000582293 SULF1Q8IWU6 871 aa20■□□□□ 0.79
RNF43-206ENST00000582293 CDCA5Q96FF9 252 aa20■□□□□ 0.79
RNF43-206ENST00000582293 TTC41PQ6P2S7 1318 aa20■□□□□ 0.79
RNF43-206ENST00000582293 CNTNAP1P78357 1384 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 GPR75-ASB3A0A0A6YYF3 556 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 MX1P20591 662 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
RNF43-206ENST00000582293 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 STAP2Q9UGK3 403 aa19.99■□□□□ 0.79
RNF43-206ENST00000582293 MYO1BO43795 1136 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 CHGBP05060 677 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 BTDP43251 543 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 RHBDL3P58872 404 aa19.98■□□□□ 0.79
RNF43-206ENST00000582293 CDAN1Q8IWY9 1227 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms