RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
ITGB4-207ENST00000580542 DDX19AQ9NUU7 478 aaKnown RBP15.82■□□□□ 0.12
ITGB4-207ENST00000580542 MTMR6Q9Y217 621 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 RPS6KA5O75582 802 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 GSDMDP57764 484 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 DDB1Q16531 1140 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 FAM43BQ6ZT52 329 aaPredicted RBP15.82■□□□□ 0.12
ITGB4-207ENST00000580542 RREB1Q92766 1687 aa15.82■□□□□ 0.12
ITGB4-207ENST00000580542 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 GJB2P29033 226 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 PLEKHA4Q9H4M7 779 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 A0A087WUV0 522 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-207ENST00000580542 TUBB4AP04350 444 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 CALRP27797 417 aaKnown RBP15.81■□□□□ 0.12
ITGB4-207ENST00000580542 TRDNQ13061 729 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 GPR161Q8N6U8 529 aaKnown RBP15.81■□□□□ 0.12
ITGB4-207ENST00000580542 CLSTN2Q9H4D0 955 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 ANXA1P04083 346 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
ITGB4-207ENST00000580542 SKIDA1Q1XH10 827 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 LRRFIP1Q32MZ4 808 aaKnown RBP15.81■□□□□ 0.12
ITGB4-207ENST00000580542 NGLY1Q96IV0 654 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 C8orf37Q96NL8 207 aa15.81■□□□□ 0.12
ITGB4-207ENST00000580542 ATRNO75882 1429 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 NRDCO43847 1150 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 CAVIN2O95810 425 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 USP8P40818 1118 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 PTH1RQ03431 593 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-207ENST00000580542 PDE11AQ9HCR9 933 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 PSDA5PKW4 1024 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-207ENST00000580542 SCP2P22307 547 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 BIRC2Q13490 618 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 MCM6Q14566 821 aa15.8■□□□□ 0.12
ITGB4-207ENST00000580542 ALDH1L1O75891 902 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
ITGB4-207ENST00000580542 ERLIN2O94905 339 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 LONRF2Q1L5Z9 754 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 ADCK5Q3MIX3 580 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 HSP90AB4PQ58FF6 505 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 GIMAP7Q8NHV1 300 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 PHLPP2Q6ZVD8 1323 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 ST3GAL1Q11201 340 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 BICD2Q8TD16 824 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 PARD6BQ9BYG5 372 aa15.79■□□□□ 0.12
ITGB4-207ENST00000580542 UTYO14607 1347 aa15.78■□□□□ 0.12
ITGB4-207ENST00000580542 IQCB1Q15051 598 aa15.78■□□□□ 0.12
ITGB4-207ENST00000580542 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
ITGB4-207ENST00000580542 LRRC31Q6UY01 552 aa15.78■□□□□ 0.12
ITGB4-207ENST00000580542 RBM28Q9NW13 759 aaKnown RBP15.78■□□□□ 0.12
ITGB4-207ENST00000580542 NBPF26B4DH59 902 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 NR1I2O75469 434 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 DDX58O95786 925 aaKnown RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 MTX1Q13505 466 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 PRPF40BQ6NWY9 871 aaKnown RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 NBPF15Q8N660 670 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 JAKMIP1Q96N16 626 aaKnown RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
ITGB4-207ENST00000580542 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 FAN1Q9Y2M0 1017 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 NHSQ6T4R5 1651 aa15.77■□□□□ 0.12
ITGB4-207ENST00000580542 APOBRQ0VD83 1088 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 VPS53Q5VIR6 699 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 RBM43Q6ZSC3 357 aaKnown RBP15.77■□□□□ 0.11
ITGB4-207ENST00000580542 C11orf57Q6ZUT1 292 aaPredicted RBP15.77■□□□□ 0.11
ITGB4-207ENST00000580542 KCNB2Q92953 911 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 SPATA32Q96LK8 384 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 USP21Q9UK80 565 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.11
ITGB4-207ENST00000580542 ONECUT3O60422 494 aaPredicted RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 SFPQP23246 707 aaKnown RBP eCLIP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 HNRNPH1P31943 449 aaKnown RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 LIG3P49916 1009 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 SETQ01105 290 aaPredicted RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 GBP6Q6ZN66 633 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 NBPF11Q86T75 865 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 RUFY2Q8WXA3 655 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 AKAP2Q9Y2D5 859 aa15.76■□□□□ 0.11
ITGB4-207ENST00000580542 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
ITGB4-207ENST00000580542 EIF3JO75822 258 aaKnown RBP15.75■□□□□ 0.11
ITGB4-207ENST00000580542 SEMA3FQ13275 785 aa15.75■□□□□ 0.11
ITGB4-207ENST00000580542 MAP9Q49MG5 647 aa15.75■□□□□ 0.11
ITGB4-207ENST00000580542 ERC1Q8IUD2 1116 aa15.75■□□□□ 0.11
ITGB4-207ENST00000580542 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
ITGB4-207ENST00000580542 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
ITGB4-207ENST00000580542 KAT2BQ92831 832 aa15.75■□□□□ 0.11
ITGB4-207ENST00000580542 TFIP11Q9UBB9 837 aaKnown RBP15.75■□□□□ 0.11
ITGB4-207ENST00000580542 HOMEZQ8IX15 550 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms