RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CNTNAP5Q8WYK1 1306 aa9.81□□□□□ -0.84
PPP4R1-216ENST00000580283 RGPD8O14715 1765 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 NFKB1P19838 968 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 KCNMA1Q12791 1236 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
PPP4R1-216ENST00000580283 PIK3R2O00459 728 aa9.79□□□□□ -0.84
PPP4R1-216ENST00000580283 GRNP28799 593 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-216ENST00000580283 SCNN1AP37088 669 aa9.79□□□□□ -0.84
PPP4R1-216ENST00000580283 ADH7P40394 386 aa9.79□□□□□ -0.84
PPP4R1-216ENST00000580283 SNRPNP63162 240 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-216ENST00000580283 CLTCL1P53675 1640 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 KIF1BO60333 1816 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 ZAP70P43403 619 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 KANK3Q6NY19 840 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 KRT27Q7Z3Y8 459 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 NWD2Q9ULI1 1742 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 USP32Q8NFA0 1604 aa9.78□□□□□ -0.84
PPP4R1-216ENST00000580283 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 PRAG1Q86YV5 1406 aa9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 XYLBO75191 536 aa9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 RARAP10276 462 aa9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 R3HDM1Q15032 1099 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 VPS72Q15906 364 aa9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.85
PPP4R1-216ENST00000580283 NUP155O75694 1391 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 SASH3O75995 380 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 RASSF7Q02833 373 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 FAM50AQ14320 339 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 SPATA31A3Q5VYP0 1347 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 UTRNP46939 3433 aa9.76□□□□□ -0.85
PPP4R1-216ENST00000580283 CDC42BPGQ6DT37 1551 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 YY1P25490 414 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 TARSP26639 723 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 DGKGP49619 791 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 PCSK7Q16549 785 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 GPR152Q8TDT2 470 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 MDFIQ99750 246 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 NRAPQ86VF7 1730 aa9.75□□□□□ -0.85
PPP4R1-216ENST00000580283 PPLO60437 1756 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 GDF11O95390 407 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 EGFRP00533 1210 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 BAG6P46379 1132 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 PHLDB3Q6NSJ2 640 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 TMEM151AQ8N4L1 468 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 DNAJB12Q9NXW2 375 aaKnown RBP9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 FNDC3AQ9Y2H6 1198 aaKnown RBP9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
PPP4R1-216ENST00000580283 HFM1A2PYH4 1435 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 FMN2Q9NZ56 1722 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 FAM83GA6ND36 823 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 GNB5O14775 395 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 ZBTB39O15060 712 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 ABL1P00519 1130 aa9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 EZH2Q15910 746 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 DHX32Q7L7V1 743 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-216ENST00000580283 CAMTA1Q9Y6Y1 1673 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 LINC00114Q6XXX2 140 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 WAPLQ7Z5K2 1190 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 CAMKK2Q96RR4 588 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 ZFATQ9P243 1243 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 NAIPQ13075 1403 aa9.72□□□□□ -0.85
PPP4R1-216ENST00000580283 CEP350Q5VT06 3117 aa9.71□□□□□ -0.85
PPP4R1-216ENST00000580283 M0R082 166 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 PCSK2P16519 638 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 MPSTP25325 297 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 MTMR3Q13615 1198 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 AAMPQ13685 434 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 ALKBH2Q6NS38 261 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 KRT28Q7Z3Y7 464 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 TTC16Q8NEE8 873 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 ZNF417Q8TAU3 575 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 ZNF587Q96SQ5 575 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 NOP53Q9NZM5 478 aaKnown RBP9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 ROCK1Q13464 1354 aa9.71□□□□□ -0.86
PPP4R1-216ENST00000580283 ALBP02768 609 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 PSAPP07602 524 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 GSK3AP49840 483 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 TRIP4Q15650 581 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 DISP2A7MBM2 1401 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 RREB1Q92766 1687 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms