RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 LOC102724428A0A0B4J2F2 783 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 CPLX1O14810 134 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 SIK1P57059 783 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 TRDNQ13061 729 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 CCDC144CPQ8IYA2 1237 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 MAGEB6Q8N7X4 407 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 AIDAQ96BJ3 306 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 AIFM3Q96NN9 605 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
ERBB2-205ENST00000578199 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 BCAMP50895 628 aa20.54■□□□□ 0.88
ERBB2-205ENST00000578199 SNW1Q13573 536 aaKnown RBP20.54■□□□□ 0.88
ERBB2-205ENST00000578199 ZNF396Q96N95 335 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-205ENST00000578199 STRBPQ96SI9 672 aaKnown RBP20.54■□□□□ 0.88
ERBB2-205ENST00000578199 NIP7Q9Y221 180 aaKnown RBP eCLIP20.53■□□□□ 0.884e-6■□□□□ 10.9
ERBB2-205ENST00000578199 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 KCNQ2O43526 872 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 CAMTA2O94983 1202 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 UQCRFS1P1P0C7P4 283 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 ARMT1Q9H993 441 aa20.53■□□□□ 0.88
ERBB2-205ENST00000578199 ZNF165P49910 485 aa20.52■□□□□ 0.88
ERBB2-205ENST00000578199 KCNQ4P56696 695 aa20.52■□□□□ 0.88
ERBB2-205ENST00000578199 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.88
ERBB2-205ENST00000578199 PCDHA7Q9UN72 937 aa20.52■□□□□ 0.88
ERBB2-205ENST00000578199 IQSEC3Q9UPP2 1182 aaPredicted RBP20.52■□□□□ 0.88
ERBB2-205ENST00000578199 NEDD4P46934 1319 aa20.52■□□□□ 0.88
ERBB2-205ENST00000578199 WTIPA6NIX2 430 aaPredicted RBP20.52■□□□□ 0.87
ERBB2-205ENST00000578199 KIF28PB7ZC32 967 aa20.52■□□□□ 0.87
ERBB2-205ENST00000578199 SLC5A1P13866 664 aa20.52■□□□□ 0.87
ERBB2-205ENST00000578199 FBXO18Q8NFZ0 1043 aa20.52■□□□□ 0.87
ERBB2-205ENST00000578199 KCNF1Q9H3M0 494 aa20.52■□□□□ 0.87
ERBB2-205ENST00000578199 PRKAB2O43741 272 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 MBD4O95243 580 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 FSIP1Q8NA03 581 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 MYL10Q9BUA6 226 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 EPB41L4AQ9HCS5 686 aaPredicted RBP20.51■□□□□ 0.87
ERBB2-205ENST00000578199 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 PLCH1Q4KWH8 1693 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 DHX16O60231 1041 aaKnown RBP20.51■□□□□ 0.87
ERBB2-205ENST00000578199 FBXW7Q969H0 707 aa20.51■□□□□ 0.87
ERBB2-205ENST00000578199 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
ERBB2-205ENST00000578199 A0A1B0GVL5 298 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 C11orf57Q6ZUT1 292 aaPredicted RBP20.5■□□□□ 0.87
ERBB2-205ENST00000578199 ENGASEQ8NFI3 743 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 PHKBQ93100 1093 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
ERBB2-205ENST00000578199 CDC27P30260 824 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 MICU3Q86XE3 530 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 IFNL3Q8IZI9 196 aa20.5■□□□□ 0.87
ERBB2-205ENST00000578199 ATRNO75882 1429 aa20.49■□□□□ 0.87
ERBB2-205ENST00000578199 UBE2Q2LH0YL09 131 aa20.49■□□□□ 0.87
ERBB2-205ENST00000578199 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
ERBB2-205ENST00000578199 NOLC1Q14978 699 aaKnown RBP eCLIP20.49■□□□□ 0.87
ERBB2-205ENST00000578199 GLIPR1L2Q4G1C9 344 aa20.49■□□□□ 0.87
ERBB2-205ENST00000578199 PIBF1Q8WXW3 757 aa20.49■□□□□ 0.87
ERBB2-205ENST00000578199 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
ERBB2-205ENST00000578199 DNTTIP2Q5QJE6 756 aaKnown RBP20.49■□□□□ 0.87
ERBB2-205ENST00000578199 NTSR2O95665 410 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 TPM2P07951 284 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 MAP3K12Q12852 859 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 MIGA1Q8NAN2 632 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 LINC00301Q8NCQ3 95 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 RTEL1Q9NZ71 1219 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 NRBP1Q9UHY1 535 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 PYCARDQ9ULZ3 195 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 WNK3Q9BYP7 1800 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
ERBB2-205ENST00000578199 FAM160A1Q05DH4 1040 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 CCDC152Q4G0S7 254 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 TRIM5Q9C035 493 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 NAPBQ9H115 298 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 COL4A1P02462 1669 aa20.48■□□□□ 0.87
ERBB2-205ENST00000578199 KINO60870 393 aaKnown RBP20.47■□□□□ 0.87
ERBB2-205ENST00000578199 PTGS1P23219 599 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
ERBB2-205ENST00000578199 CHRNDQ07001 517 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 ATL3Q6DD88 541 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 APOA5Q6Q788 366 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 IGDCC4Q8TDY8 1250 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 AK7Q96M32 723 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 ZSWIM5Q9P217 1185 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
ERBB2-205ENST00000578199 NDUFA8P51970 172 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 STK38Q15208 465 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 SF3A1Q15459 793 aaKnown RBP20.47■□□□□ 0.87
ERBB2-205ENST00000578199 MYSM1Q5VVJ2 828 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 LCORLQ8N3X6 602 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 ZKSCAN3Q9BRR0 538 aa20.47■□□□□ 0.87
ERBB2-205ENST00000578199 ZMYM6O95789 1325 aa20.46■□□□□ 0.87
ERBB2-205ENST00000578199 WDR19Q8NEZ3 1342 aa20.46■□□□□ 0.87
ERBB2-205ENST00000578199 GSG1L2A8MUP6 293 aa20.46■□□□□ 0.87
ERBB2-205ENST00000578199 C3orf67Q6ZVT6 689 aa20.46■□□□□ 0.87
ERBB2-205ENST00000578199 DRC7Q8IY82 874 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms