RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 IRS4O14654 1257 aaPredicted RBP10.43□□□□□ -0.74
NCBP3-204ENST00000574911 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 CACTINQ8WUQ7 758 aaKnown RBP10.43□□□□□ -0.74
NCBP3-204ENST00000574911 SLC4A9Q96Q91 983 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 ITGB4P16144 1822 aa10.43□□□□□ -0.74
NCBP3-204ENST00000574911 PDE8BO95263 885 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 ARID4AP29374 1257 aaPredicted RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 NDUFA8P51970 172 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 STK38Q15208 465 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 SLC9C2Q5TAH2 1124 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 BCL9O00512 1426 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 LRP5O75197 1615 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 NHSL1Q5SYE7 1610 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 A0A1B0GVL5 298 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 KIF28PB7ZC32 967 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 SH2B2O14492 632 aaPredicted RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 KIF23Q02241 960 aaPredicted RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 RAB11FIP4Q86YS3 637 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 TBC1D10CQ8IV04 446 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 NEDD4P46934 1319 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 A0A087WWV3 80 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 TCRBV5S4A2TA0A5A2 114 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 BECN2A8MW95 431 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 CPLX1O14810 134 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 SPTLC2O15270 562 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 PDE8AO60658 829 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 POLR3DP05423 398 aaPredicted RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 CHAF1AQ13111 956 aaPredicted RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 TSC1Q92574 1164 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 DENND2AQ9ULE3 1009 aa10.42□□□□□ -0.74
NCBP3-204ENST00000574911 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
NCBP3-204ENST00000574911 ERVV-1B6SEH8 477 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 TRDNQ13061 729 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 SF3A1Q15459 793 aaKnown RBP10.41□□□□□ -0.74
NCBP3-204ENST00000574911 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
NCBP3-204ENST00000574911 GJB4Q9NTQ9 266 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 TRMT112Q9UI30 125 aaKnown RBP10.41□□□□□ -0.74
NCBP3-204ENST00000574911 ZBTB1Q9Y2K1 713 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 ZNF532Q9HCE3 1301 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 STRCQ7RTU9 1775 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 ARAP2Q8WZ64 1704 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 PDE6AP16499 860 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 FGFR2P21802 821 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 PHKA1P46020 1223 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 LRRC8AQ8IWT6 810 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 BPIFA3Q9BQP9 254 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 KIAA1468Q9P260 1216 aa10.41□□□□□ -0.74
NCBP3-204ENST00000574911 MYH3P11055 1940 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
NCBP3-204ENST00000574911 NEMFO60524 1076 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 RBM6P78332 1123 aaKnown RBP10.4□□□□□ -0.74
NCBP3-204ENST00000574911 ALX1Q15699 326 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 AXDND1Q5T1B0 1012 aaPredicted RBP10.4□□□□□ -0.74
NCBP3-204ENST00000574911 ZNF34Q8IZ26 560 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 ERCC4Q92889 916 aaPredicted RBP10.4□□□□□ -0.74
NCBP3-204ENST00000574911 STRBPQ96SI9 672 aaKnown RBP10.4□□□□□ -0.74
NCBP3-204ENST00000574911 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 BCL2L12Q9HB09 334 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 BTG4Q9NY30 223 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 WWC3Q9ULE0 1092 aa10.4□□□□□ -0.74
NCBP3-204ENST00000574911 IDH1O75874 414 aaKnown RBP10.4□□□□□ -0.75
NCBP3-204ENST00000574911 METAP2P50579 478 aaKnown RBP eCLIP10.4□□□□□ -0.75
NCBP3-204ENST00000574911 SYNE3Q6ZMZ3 975 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 LPIN2Q92539 896 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 TMEM87BQ96K49 555 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 TBC1D2BQ9UPU7 963 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 MROH5Q6ZUA9 1318 aa10.4□□□□□ -0.75
NCBP3-204ENST00000574911 ZNF335Q9H4Z2 1342 aaPredicted RBP10.4□□□□□ -0.75
NCBP3-204ENST00000574911 SLIT2O94813 1529 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 CTIFO43310 598 aaKnown RBP10.39□□□□□ -0.75
NCBP3-204ENST00000574911 CDKL5O76039 1030 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 CMA1P23946 247 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 IL6STP40189 918 aaPredicted RBP10.39□□□□□ -0.75
NCBP3-204ENST00000574911 SLC39A14Q15043 492 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 PUM3Q15397 648 aaKnown RBP10.39□□□□□ -0.75
NCBP3-204ENST00000574911 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 AK7Q96M32 723 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 ALG1Q9BT22 464 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 NUP98P52948 1817 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 ZNF202O95125 648 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 APPP05067 770 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 CDC27P30260 824 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 DZIP3Q86Y13 1208 aaKnown RBP10.39□□□□□ -0.75
NCBP3-204ENST00000574911 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
NCBP3-204ENST00000574911 B4E1Z4 1266 aa10.38□□□□□ -0.75
NCBP3-204ENST00000574911 WDHD1O75717 1129 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms