RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 GMCL1Q96IK5 515 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 GAS2L1Q99501 681 aaPredicted RBP8.31□□□□□ -1.08
LINC00556-201ENST00000569603 POLR3GLQ9BT43 218 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 GRIP2Q9C0E4 1043 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 ARHGEF10LQ9HCE6 1279 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 PCDHB11Q9Y5F2 797 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
LINC00556-201ENST00000569603 KCNA3P22001 575 aa8.3□□□□□ -1.08
LINC00556-201ENST00000569603 NR1H3Q13133 447 aa8.3□□□□□ -1.08
LINC00556-201ENST00000569603 NBPF10Q6P3W6 841 aaKnown RBP8.3□□□□□ -1.08
LINC00556-201ENST00000569603 INTS5Q6P9B9 1019 aaKnown RBP8.3□□□□□ -1.08
LINC00556-201ENST00000569603 NBPF15Q8N660 670 aa8.3□□□□□ -1.08
LINC00556-201ENST00000569603 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
LINC00556-201ENST00000569603 KNSTRNQ9Y448 316 aa8.3□□□□□ -1.08
LINC00556-201ENST00000569603 TRAK2O60296 914 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 MTHFSP49914 203 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 CABP4P57796 275 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 CYP2U1Q7Z449 544 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 NLGN1Q8N2Q7 840 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 CCER1Q8TC90 406 aaPredicted RBP8.29□□□□□ -1.08
LINC00556-201ENST00000569603 ACDQ96AP0 544 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 RAB6BQ9NRW1 208 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
LINC00556-201ENST00000569603 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
LINC00556-201ENST00000569603 CNTNAP5Q8WYK1 1306 aa8.29□□□□□ -1.08
LINC00556-201ENST00000569603 USP42Q9H9J4 1324 aaKnown RBP8.29□□□□□ -1.08
LINC00556-201ENST00000569603 SBF1O95248 1867 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 SPATA31C2B4DYI2 1134 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 THBS1P07996 1170 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 CRKLP46109 303 aaKnown RBP8.28□□□□□ -1.08
LINC00556-201ENST00000569603 DDR1Q08345 913 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 SLC52A2Q9HAB3 445 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 LGR6Q9HBX8 967 aa8.28□□□□□ -1.08
LINC00556-201ENST00000569603 SOS1Q07889 1333 aaPredicted RBP8.28□□□□□ -1.08
LINC00556-201ENST00000569603 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.08
LINC00556-201ENST00000569603 H7C1W4 665 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 PTCD1O75127 700 aaKnown RBP8.27□□□□□ -1.09
LINC00556-201ENST00000569603 BCRP11274 1271 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 TM4SF1P30408 202 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 TGFB2P61812 414 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
LINC00556-201ENST00000569603 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 ENAMQ9NRM1 1142 aa8.27□□□□□ -1.09
LINC00556-201ENST00000569603 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
LINC00556-201ENST00000569603 CEMIPQ8WUJ3 1361 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 RNMTO43148 476 aaKnown RBP8.26□□□□□ -1.09
LINC00556-201ENST00000569603 ITGB2P05107 769 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 CYP19A1P11511 503 aaPredicted RBP8.26□□□□□ -1.09
LINC00556-201ENST00000569603 DPEP1P16444 411 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 C1orf141Q5JVX7 400 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 TIMMDC1Q9NPL8 285 aa8.26□□□□□ -1.09
LINC00556-201ENST00000569603 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC00556-201ENST00000569603 A0A0G2JLW4 131 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 POLRMTO00411 1230 aaKnown RBP8.25□□□□□ -1.09
LINC00556-201ENST00000569603 IL2RAP01589 272 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 HMOX1P09601 288 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 RFC4P35249 363 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 NEDD1Q8NHV4 660 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 TRERF1Q96PN7 1200 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 NUCKS1Q9H1E3 243 aaKnown RBP8.25□□□□□ -1.09
LINC00556-201ENST00000569603 WWC3Q9ULE0 1092 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
LINC00556-201ENST00000569603 SCN7AQ01118 1682 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 DIAPH1O60610 1272 aaKnown RBP8.24□□□□□ -1.09
LINC00556-201ENST00000569603 MX2P20592 715 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 SLC39A6Q13433 755 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 PLA2G4EQ3MJ16 856 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 CC2D1BQ5T0F9 858 aaKnown RBP8.24□□□□□ -1.09
LINC00556-201ENST00000569603 IL17REQ8NFR9 667 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 CCDC87Q9NVE4 849 aa8.24□□□□□ -1.09
LINC00556-201ENST00000569603 EIF5P55010 431 aaKnown RBP8.23□□□□□ -1.09
LINC00556-201ENST00000569603 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
LINC00556-201ENST00000569603 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
LINC00556-201ENST00000569603 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 NARFQ9UHQ1 456 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 ZBTB1Q9Y2K1 713 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
LINC00556-201ENST00000569603 COL15A1P39059 1388 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 PHF20L1A8MW92 1017 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 RAD21O60216 631 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 F11P03951 625 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 PRELPP51888 382 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 NFIXQ14938 502 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 PARP3Q9Y6F1 533 aa8.22□□□□□ -1.09
LINC00556-201ENST00000569603 COL11A2P13942 1736 aaPredicted RBP8.22□□□□□ -1.09
LINC00556-201ENST00000569603 BCORQ6W2J9 1755 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 425.3 ms