RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 SP8Q8IXZ3 490 aa26.78■■□□□ 1.88
VCPKMT-205ENST00000569518 TDRD7Q8NHU6 1098 aaKnown RBP26.78■■□□□ 1.88
VCPKMT-205ENST00000569518 GGA1Q9UJY5 639 aa26.78■■□□□ 1.88
VCPKMT-205ENST00000569518 EXOSC10Q01780 885 aaKnown RBP26.77■■□□□ 1.88
VCPKMT-205ENST00000569518 LCORLQ8N3X6 602 aa26.77■■□□□ 1.88
VCPKMT-205ENST00000569518 EPB41L4AQ9HCS5 686 aaPredicted RBP26.77■■□□□ 1.88
VCPKMT-205ENST00000569518 ATP6V0A2Q9Y487 856 aa26.77■■□□□ 1.88
VCPKMT-205ENST00000569518 KIAA1551Q9HCM1 1747 aa26.77■■□□□ 1.88
VCPKMT-205ENST00000569518 PATL2C9JE40 543 aaKnown RBP26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 HAND2P61296 217 aa26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 ST3GAL1Q11201 340 aa26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 PKP1Q13835 747 aa26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 ZNF804AQ7Z570 1209 aa26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 NBPF3Q9H094 633 aa26.76■■□□□ 1.88
VCPKMT-205ENST00000569518 GNAT2P19087 354 aa26.76■■□□□ 1.87
VCPKMT-205ENST00000569518 SF3B2Q13435 895 aaKnown RBP26.76■■□□□ 1.87
VCPKMT-205ENST00000569518 GPR101Q96P66 508 aaPredicted RBP26.76■■□□□ 1.87
VCPKMT-205ENST00000569518 SALL1Q9NSC2 1324 aa26.76■■□□□ 1.87
VCPKMT-205ENST00000569518 CCDC88AQ3V6T2 1871 aa26.76■■□□□ 1.87
VCPKMT-205ENST00000569518 GSG1L2A8MUP6 293 aa26.75■■□□□ 1.87
VCPKMT-205ENST00000569518 DEFB132Q7Z7B7 95 aa26.75■■□□□ 1.87
VCPKMT-205ENST00000569518 TBC1D16Q8TBP0 767 aa26.75■■□□□ 1.87
VCPKMT-205ENST00000569518 POLLQ9UGP5 575 aa26.75■■□□□ 1.87
VCPKMT-205ENST00000569518 DUOX1Q9NRD9 1551 aa26.75■■□□□ 1.87
VCPKMT-205ENST00000569518 ZNF213O14771 459 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 TMED8Q6PL24 325 aaPredicted RBP26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 MIGA1Q8NAN2 632 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 NSUN4Q96CB9 384 aaKnown RBP26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 AGXT2Q9BYV1 514 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 TIAM2Q8IVF5 1701 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 APPP05067 770 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 CHAF1AQ13111 956 aaPredicted RBP26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 CLEC17AQ6ZS10 378 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 Q6ZUG5 572 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 IFNL3Q8IZI9 196 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 MASTLQ96GX5 879 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 RIOK1Q9BRS2 568 aaKnown RBP26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 ZDHHC9Q9Y397 364 aa26.74■■□□□ 1.87
VCPKMT-205ENST00000569518 ALDH1B1P30837 517 aa26.73■■□□□ 1.87
VCPKMT-205ENST00000569518 MCM4P33991 863 aa26.73■■□□□ 1.87
VCPKMT-205ENST00000569518 NAA16Q6N069 864 aaPredicted RBP26.73■■□□□ 1.87
VCPKMT-205ENST00000569518 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.73■■□□□ 1.87
VCPKMT-205ENST00000569518 IGSF3O75054 1194 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 MECOMQ03112 1051 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 CCDC83Q8IWF9 413 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 FBXL16Q8N461 479 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 MAGEB6P1A0A0J9YX57 407 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 PRKAB2O43741 272 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 PRDX5P30044 214 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 MB21D2Q8IYB1 491 aaPredicted RBP26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 WDR66Q8TBY9 1149 aa26.72■■□□□ 1.87
VCPKMT-205ENST00000569518 CHD4Q14839 1912 aa26.71■■□□□ 1.87
VCPKMT-205ENST00000569518 IL1R1P14778 569 aa26.71■■□□□ 1.87
VCPKMT-205ENST00000569518 TBC1D10CQ8IV04 446 aa26.71■■□□□ 1.87
VCPKMT-205ENST00000569518 CD209Q9NNX6 404 aa26.71■■□□□ 1.87
VCPKMT-205ENST00000569518 SLC4A4Q9Y6R1 1079 aa26.71■■□□□ 1.87
VCPKMT-205ENST00000569518 NECAB1Q8N987 351 aa26.7■■□□□ 1.87
VCPKMT-205ENST00000569518 LRRC2Q9BYS8 371 aa26.7■■□□□ 1.87
VCPKMT-205ENST00000569518 SPTY2D1Q68D10 685 aaPredicted RBP26.69■■□□□ 1.86
VCPKMT-205ENST00000569518 NAPBQ9H115 298 aa26.69■■□□□ 1.86
VCPKMT-205ENST00000569518 NCOA7Q8NI08 942 aa26.69■■□□□ 1.86
VCPKMT-205ENST00000569518 BRF1Q92994 677 aa26.69■■□□□ 1.86
VCPKMT-205ENST00000569518 JAG2Q9Y219 1238 aa26.69■■□□□ 1.86
VCPKMT-205ENST00000569518 WDR19Q8NEZ3 1342 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 BRD1O95696 1058 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 STYK1Q6J9G0 422 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 C2CD5Q86YS7 1000 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 GBP4Q96PP9 640 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 NACAP1Q9BZK3 213 aa26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 PDGFDQ9GZP0 370 aaPredicted RBP26.68■■□□□ 1.86
VCPKMT-205ENST00000569518 SMC3Q9UQE7 1217 aa26.67■■□□□ 1.86
VCPKMT-205ENST00000569518 C6orf229H3BNL8 230 aa26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 MCM5P33992 734 aa26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 ANTXR2P58335 489 aa26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 DYNLL1P63167 89 aaKnown RBP26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 OLFM4Q6UX06 510 aa26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 GTF3C6Q969F1 213 aa26.66■■□□□ 1.86
VCPKMT-205ENST00000569518 RALYLQ86SE5 291 aaKnown RBP26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 H0YIN7 160 aa26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 TDO2P48775 406 aa26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 EVCP57679 992 aa26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 FGD1P98174 961 aa26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 CHST3Q7LGC8 479 aa26.65■■□□□ 1.86
VCPKMT-205ENST00000569518 SLX4Q8IY92 1834 aa26.64■■□□□ 1.86
VCPKMT-205ENST00000569518 PRC1O43663 620 aa26.64■■□□□ 1.85
VCPKMT-205ENST00000569518 LDHBP07195 334 aaKnown RBP26.64■■□□□ 1.85
VCPKMT-205ENST00000569518 MPNDQ8N594 471 aa26.64■■□□□ 1.85
VCPKMT-205ENST00000569518 SDR42E1Q8WUS8 393 aa26.64■■□□□ 1.85
VCPKMT-205ENST00000569518 NEDD4P46934 1319 aa26.64■■□□□ 1.85
VCPKMT-205ENST00000569518 DDX11L8A8MPP1 907 aa26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 BAG4O95429 457 aaKnown RBP26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 DZIP1Q86YF9 867 aaKnown RBP26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 NKX2-3Q8TAU0 364 aa26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 ZNF622Q969S3 477 aaKnown RBP eCLIP26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 C10orf71Q711Q0 1435 aa26.63■■□□□ 1.85
VCPKMT-205ENST00000569518 PFKFB2O60825 505 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 GJB2P29033 226 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 APOBRQ0VD83 1088 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 TRDNQ13061 729 aa26.62■■□□□ 1.85
VCPKMT-205ENST00000569518 GRIK5Q16478 980 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms