RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 GAS2L3Q86XJ1 694 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 SLC4A9Q96Q91 983 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 CDC5LQ99459 802 aaKnown RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 PUS3Q9BZE2 481 aaKnown RBP6.75□□□□□ -1.33
CDH13-213ENST00000569454 TSPY26PQ9H489 355 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 GREM2Q9H772 168 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 UBN2Q6ZU65 1347 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 CNTNAP4Q9C0A0 1308 aa6.75□□□□□ -1.33
CDH13-213ENST00000569454 MYH7P12883 1935 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 SYCE3A1L190 88 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 GOLGA6L4A6NEF3 574 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 E7EWF7 191 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 H3BQV1 296 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 FIBPO43427 364 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 CAMTA2O94983 1202 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 GNAT2P19087 354 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 CDK11BP21127 795 aaKnown RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 HMGB2P26583 209 aaKnown RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 MCM5P33992 734 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 ADD2P35612 726 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 IGHMBP2P38935 993 aaKnown RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 ST3GAL1Q11201 340 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 TRDNQ13061 729 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 VPS72Q15906 364 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 FOXD4L5Q5VV16 416 aaPredicted RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 CCDC129Q6ZRS4 1044 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 Q6ZUG5 572 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 SMARCC2Q8TAQ2 1214 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 FOXD4L4Q8WXT5 416 aaPredicted RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 BRF1Q92994 677 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 MPHOSPH8Q99549 860 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 MTA3Q9BTC8 594 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 PANK2Q9BZ23 570 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 DDX19AQ9NUU7 478 aaKnown RBP6.74□□□□□ -1.33
CDH13-213ENST00000569454 CFAP45Q9UL16 551 aa6.74□□□□□ -1.33
CDH13-213ENST00000569454 M0R2C6 588 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 ZNF213O14771 459 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 GPAA1O43292 621 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CDKL5O76039 1030 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 ADAMTS2O95450 1211 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 NTSR2O95665 410 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CAVIN2O95810 425 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 FGFR2P21802 821 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 ADORA1P30542 326 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CLCN1P35523 988 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 MCAMP43121 646 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 ZAP70P43403 619 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 NT5C2P49902 561 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 EMP3P54852 163 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 EXOSC10Q01780 885 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 ALX1Q15699 326 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CCDC102BQ68D86 513 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 STOX1Q6ZVD7 989 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 IFNL1Q8IU54 200 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 IFNLR1Q8IU57 520 aaPredicted RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 NECAB1Q8N987 351 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 MARCH10Q8NA82 808 aaPredicted RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 OSBP2Q969R2 916 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 PDLIM2Q96JY6 352 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 ZNF396Q96N95 335 aaPredicted RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 SEC62Q99442 399 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 NYXQ9GZU5 481 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CNPY2Q9Y2B0 182 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 LAMA4Q16363 1823 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 SALL1Q9NSC2 1324 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 TIAM2Q8IVF5 1701 aa6.73□□□□□ -1.33
CDH13-213ENST00000569454 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
CDH13-213ENST00000569454 PDE4DIPQ5VU43 2346 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 NHSQ6T4R5 1651 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 DOCK2Q92608 1830 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 PTPDC1A2A3K4 754 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 ESPNB1AK53 854 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 SEMA3EO15041 775 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 RCAN1P53805 252 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 DNM1Q05193 864 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 SLC9C2Q5TAH2 1124 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 RC3H1Q5TC82 1133 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 CDC37L1Q7L3B6 337 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 NSUN7Q8NE18 718 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 AIDAQ96BJ3 306 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 TMEM87BQ96K49 555 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 SPATA32Q96LK8 384 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 NACAP1Q9BZK3 213 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 CNNM2Q9H8M5 875 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 GNL3LQ9NVN8 582 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 RBM27Q9P2N5 1060 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 NIP7Q9Y221 180 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDH13-213ENST00000569454 NDUFB9Q9Y6M9 179 aa6.72□□□□□ -1.33
CDH13-213ENST00000569454 PDS5AQ29RF7 1337 aaKnown RBP6.72□□□□□ -1.33
CDH13-213ENST00000569454 PNPLA7Q6ZV29 1317 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms