RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 TSC1Q92574 1164 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 AIDAQ96BJ3 306 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 LLPHQ9BRT6 129 aaKnown RBP10.23□□□□□ -0.77
LINC00558-201ENST00000569422 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 PTGS1P23219 599 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 SUSD4Q5VX71 490 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 PHKBQ93100 1093 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 CARMIL3Q8ND23 1372 aa10.23□□□□□ -0.77
LINC00558-201ENST00000569422 KDM4FA0A1W2PPD8 638 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 PDE8AO60658 829 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 KINO60870 393 aaKnown RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ANTXR2P58335 489 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ISM2Q6H9L7 571 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 TBC1D10CQ8IV04 446 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ZNF274Q96GC6 653 aaPredicted RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 SDF4Q9BRK5 362 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ZKSCAN3Q9BRR0 538 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 PYCARDQ9ULZ3 195 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 CLIC4Q9Y696 253 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 CTDSPL2Q05D32 466 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 STK38Q15208 465 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 NAA16Q6N069 864 aaPredicted RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 CCDC186Q7Z3E2 898 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 MIGA1Q8NAN2 632 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ZNF396Q96N95 335 aaPredicted RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 UBE2Q2LH0YL09 131 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 TPM2P07951 284 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 MARCKSP29966 332 aaPredicted RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ADD2P35612 726 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 BCAMP50895 628 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 LRMPQ12912 555 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 CYB5R4Q7L1T6 521 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ILDR1Q86SU0 546 aaPredicted RBP10.22□□□□□ -0.77
LINC00558-201ENST00000569422 ARMT1Q9H993 441 aa10.22□□□□□ -0.77
LINC00558-201ENST00000569422 WTIPA6NIX2 430 aaPredicted RBP10.21□□□□□ -0.77
LINC00558-201ENST00000569422 BECN2A8MW95 431 aa10.21□□□□□ -0.77
LINC00558-201ENST00000569422 GOLGA6L19H0YKK7 550 aa10.21□□□□□ -0.77
LINC00558-201ENST00000569422 BIN1O00499 593 aa10.21□□□□□ -0.77
LINC00558-201ENST00000569422 PRKAB2O43741 272 aa10.21□□□□□ -0.77
LINC00558-201ENST00000569422 PDE6AP16499 860 aa10.21□□□□□ -0.77
LINC00558-201ENST00000569422 C11orf57Q6ZUT1 292 aaPredicted RBP10.21□□□□□ -0.77
LINC00558-201ENST00000569422 MB21D2Q8IYB1 491 aaPredicted RBP10.21□□□□□ -0.77
LINC00558-201ENST00000569422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC00558-201ENST00000569422 PLA2G12BQ9BX93 195 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 KCNF1Q9H3M0 494 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 ABCF2Q9UG63 623 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 PCDHA7Q9UN72 937 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 NIP7Q9Y221 180 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC00558-201ENST00000569422 TNS2Q63HR2 1409 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 GLI3P10071 1580 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.78
LINC00558-201ENST00000569422 MBD4O95243 580 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 DDB1Q16531 1140 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
LINC00558-201ENST00000569422 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 RCOR1Q9UKL0 485 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC00558-201ENST00000569422 ZSCAN25Q6NSZ9 544 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 PIBF1Q8WXW3 757 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 NAPBQ9H115 298 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 GOLGA6L6A8MZA4 724 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 CLGNO14967 610 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 DHX16O60231 1041 aaKnown RBP10.2□□□□□ -0.78
LINC00558-201ENST00000569422 CRKLP46109 303 aaKnown RBP10.2□□□□□ -0.78
LINC00558-201ENST00000569422 RASGRF1Q13972 1273 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 PUM3Q15397 648 aaKnown RBP10.2□□□□□ -0.78
LINC00558-201ENST00000569422 SPATA5Q8NB90 893 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
LINC00558-201ENST00000569422 RIC1Q4ADV7 1423 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 KCNQ2O43526 872 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 NDUFA8P51970 172 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 ZRSR1Q15695 479 aaKnown RBP10.19□□□□□ -0.78
LINC00558-201ENST00000569422 VGLL2Q8N8G2 317 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 LPIN2Q92539 896 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 ALG1Q9BT22 464 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 LRP2BPQ9P2M1 347 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 SLC5A1P13866 664 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 ATP2B1P20020 1258 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 CDC27P30260 824 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
LINC00558-201ENST00000569422 TDO2P48775 406 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 TTF1Q15361 905 aaPredicted RBP10.19□□□□□ -0.78
LINC00558-201ENST00000569422 TMEM67Q5HYA8 995 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 FILIP1Q7Z7B0 1213 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
LINC00558-201ENST00000569422 CLIP2Q9UDT6 1046 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 NEDD4P46934 1319 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 CDHR2Q9BYE9 1310 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 SALL1Q9NSC2 1324 aa10.19□□□□□ -0.78
LINC00558-201ENST00000569422 IFIT3O14879 490 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms