RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ARXQ96QS3 562 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 TSPYL4Q9UJ04 414 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 NOVA2Q9UNW9 492 aaKnown RBP7.31□□□□□ -1.24
SF3B3-210ENST00000567654 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
SF3B3-210ENST00000567654 KIF16BQ96L93 1317 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 TUBGCP6Q96RT7 1819 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 MAN1A2O60476 641 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 PLEKHO1Q53GL0 409 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-210ENST00000567654 AKAP4Q5JQC9 854 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 SLC27A3Q5K4L6 730 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 G2E3Q7L622 706 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 DZIP1LQ8IYY4 767 aaKnown RBP7.3□□□□□ -1.24
SF3B3-210ENST00000567654 PRDM11Q9NQV5 511 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 NLRP2Q9NX02 1062 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 NUP188Q5SRE5 1749 aa7.3□□□□□ -1.24
SF3B3-210ENST00000567654 ABCC4O15439 1325 aa7.29□□□□□ -1.24
SF3B3-210ENST00000567654 WDR17Q8IZU2 1322 aa7.29□□□□□ -1.24
SF3B3-210ENST00000567654 RNMTO43148 476 aaKnown RBP7.29□□□□□ -1.24
SF3B3-210ENST00000567654 CSB-PGBD3P0DP91 1061 aa7.29□□□□□ -1.24
SF3B3-210ENST00000567654 PHKA2P46019 1235 aa7.29□□□□□ -1.24
SF3B3-210ENST00000567654 RNF144AP50876 292 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-210ENST00000567654 ZNF428Q96B54 188 aa7.29□□□□□ -1.24
SF3B3-210ENST00000567654 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-210ENST00000567654 CYP27B1O15528 508 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 ATG7O95352 703 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 PHKG2P15735 406 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 TATP17735 454 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-210ENST00000567654 SMTNP53814 917 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 POU4F2Q12837 409 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 TAF7Q15545 349 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-210ENST00000567654 AMOTQ4VCS5 1084 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 ZNF787Q6DD87 383 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 ITPRIPQ8IWB1 547 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 FTSJ3Q8IY81 847 aaKnown RBP7.28□□□□□ -1.24
SF3B3-210ENST00000567654 ZSCAN10Q96SZ4 725 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-210ENST00000567654 HINFPQ9BQA5 517 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 GRIP2Q9C0E4 1043 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 SENP2Q9HC62 589 aa7.28□□□□□ -1.24
SF3B3-210ENST00000567654 RBM19Q9Y4C8 960 aaKnown RBP7.28□□□□□ -1.24
SF3B3-210ENST00000567654 A6NJY4 79 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 SEC13P55735 322 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 EIF4A1P60842 406 aaKnown RBP7.27□□□□□ -1.25
SF3B3-210ENST00000567654 C1orf141Q5JVX7 400 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 TMEM164Q5U3C3 297 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 TMEM214Q6NUQ4 689 aaKnown RBP7.27□□□□□ -1.25
SF3B3-210ENST00000567654 CENPQQ7L2Z9 268 aaPredicted RBP7.27□□□□□ -1.25
SF3B3-210ENST00000567654 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 RAPGEF4Q8WZA2 1011 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 STRN4Q9NRL3 753 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 TJP1Q07157 1748 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 KCPQ6ZWJ8 1503 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 DISP2A7MBM2 1401 aa7.27□□□□□ -1.25
SF3B3-210ENST00000567654 PLEKHG2Q9H7P9 1386 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 HEG1Q9ULI3 1381 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 PRAMEF22A3QJZ6 481 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 EPHA4P54764 986 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 TOM1L2Q6ZVM7 507 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 LYSMD3Q7Z3D4 306 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 ARHGAP45Q92619 1136 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 KIFC2Q96AC6 838 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 SLC4A9Q96Q91 983 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 TSPAN10Q9H1Z9 355 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-210ENST00000567654 ZBTB40Q9NUA8 1239 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 PARP3Q9Y6F1 533 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 AK9Q5TCS8 1911 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 ATP10DQ9P241 1426 aa7.26□□□□□ -1.25
SF3B3-210ENST00000567654 CASZ1Q86V15 1759 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 SBF2Q86WG5 1849 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 BTBD11A6QL63 1104 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 F6X3S4 739 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 BACH1O14867 736 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 IPO8O15397 1037 aaKnown RBP7.25□□□□□ -1.25
SF3B3-210ENST00000567654 PIP4K2BP78356 416 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 TEFQ10587 303 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 SLC39A6Q13433 755 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 BTG4Q9NY30 223 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 DDX19BQ9UMR2 479 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 LRP6O75581 1613 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 ANKRD36CQ5JPF3 1778 aa7.25□□□□□ -1.25
SF3B3-210ENST00000567654 PXDNLA1KZ92 1463 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 ANXA1P04083 346 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 GPC1P35052 558 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 VEGFBP49765 207 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.24□□□□□ -1.25
SF3B3-210ENST00000567654 C4orf17Q53FE4 359 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 SLC9A9Q8IVB4 645 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 IFNL2Q8IZJ0 200 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 RETREG2Q8NC44 543 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 PRIMPOLQ96LW4 560 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 API5Q9BZZ5 524 aaKnown RBP7.24□□□□□ -1.25
SF3B3-210ENST00000567654 SLC52A2Q9HAB3 445 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 SCHIP1Q9P0W5 487 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-210ENST00000567654 IQSEC3Q9UPP2 1182 aaPredicted RBP7.24□□□□□ -1.25
SF3B3-210ENST00000567654 SPG7Q9UQ90 795 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 PTPRCP08575 1304 aa7.24□□□□□ -1.25
SF3B3-210ENST00000567654 NUP98P52948 1817 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms