RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 BAG6P46379 1132 aa12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 HELLSQ9NRZ9 838 aa12.79□□□□□ -0.36
PDXDC1-214ENST00000566633 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 ADD2P35612 726 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 GPSM2P81274 684 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 CYP21A2P08686 494 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 UBE2HP62256 183 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 CHAF1AQ13111 956 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 LAMB2P55268 1798 aa12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 TNS1Q9HBL0 1735 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-214ENST00000566633 PDE6AP16499 860 aa12.77□□□□□ -0.36
PDXDC1-214ENST00000566633 TTF1Q15361 905 aaPredicted RBP12.77□□□□□ -0.36
PDXDC1-214ENST00000566633 APPBP2Q92624 585 aa12.77□□□□□ -0.36
PDXDC1-214ENST00000566633 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.365e-8■■□□□ 13
PDXDC1-214ENST00000566633 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.36
PDXDC1-214ENST00000566633 GPAA1O43292 621 aa12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■□□□□ 11.3
PDXDC1-214ENST00000566633 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 TSPY26PQ9H489 355 aa12.77□□□□□ -0.37
PDXDC1-214ENST00000566633 VPS37CA5D8V6 355 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 FOXP2O15409 715 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 SRGNP10124 158 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 PDCP20941 246 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 HAND2P61296 217 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 FIBPO43427 364 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 CHRNA5P30532 468 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 KLRG2A4D1S0 409 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 UFL1O94874 794 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 GNL3LQ9NVN8 582 aaKnown RBP12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 POLLQ9UGP5 575 aa12.76□□□□□ -0.37
PDXDC1-214ENST00000566633 COL1A1P02452 1464 aaPredicted RBP12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 APPP05067 770 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 ADGRA1Q86SQ6 560 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 DSCC1Q9BVC3 393 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 AKAP11Q9UKA4 1901 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 XDHP47989 1333 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 BBOX1O75936 387 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 FGAP02671 866 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 STK3Q13188 491 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 HS1BP3Q53T59 392 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 Q6ZUG5 572 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 LRRC2Q9BYS8 371 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
PDXDC1-214ENST00000566633 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 PRKAB2O43741 272 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 LETM1O95202 739 aaPredicted RBP12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 PRDX5P30044 214 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
PDXDC1-214ENST00000566633 IRS2Q9Y4H2 1338 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 MBD4O95243 580 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 LEMD3Q9Y2U8 911 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 CYP7A1P22680 504 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 PDE6BP35913 854 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 DHX32Q7L7V1 743 aaKnown RBP12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 FERMT3Q86UX7 667 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 LCORLQ8N3X6 602 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
PDXDC1-214ENST00000566633 NPR1P16066 1061 aa12.72□□□□□ -0.37
PDXDC1-214ENST00000566633 GRIK5Q16478 980 aa12.72□□□□□ -0.37
PDXDC1-214ENST00000566633 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
PDXDC1-214ENST00000566633 STRBPQ96SI9 672 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms