RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EPS15P42566 896 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 CLCN6P51797 869 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 IQCEQ6IPM2 695 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 ANKLE2Q86XL3 938 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 AMOTL1Q8IY63 956 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 CAPZA3Q96KX2 299 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 ADGRB3O60242 1522 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 SHTN1A0MZ66 631 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 NEURL1BA8MQ27 555 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 B4E1Z4 1266 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 GCP02774 474 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 IVLP07476 585 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 CCT6AP40227 531 aaKnown RBP12.02□□□□□ -0.49
USB1-212ENST00000566082 ZSCAN26Q16670 478 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 PRDM11Q9NQV5 511 aa12.02□□□□□ -0.49
USB1-212ENST00000566082 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
USB1-212ENST00000566082 SPA17Q15506 151 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 DRC1Q96MC2 740 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
USB1-212ENST00000566082 WTAPQ15007 396 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 RTN1Q16799 776 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 KRT40Q6A162 431 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 ATP1A3P13637 1013 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 CDK5RAP3Q96JB5 506 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 ADCY9O60503 1353 aa12.01□□□□□ -0.49
USB1-212ENST00000566082 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
USB1-212ENST00000566082 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
USB1-212ENST00000566082 HDXQ7Z353 690 aa12□□□□□ -0.49
USB1-212ENST00000566082 GPATCH11Q8N954 259 aa12□□□□□ -0.49
USB1-212ENST00000566082 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
USB1-212ENST00000566082 LONRF3Q496Y0 759 aa12□□□□□ -0.49
USB1-212ENST00000566082 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
USB1-212ENST00000566082 CLIC6Q96NY7 704 aa12□□□□□ -0.49
USB1-212ENST00000566082 ST7Q9NRC1 585 aa12□□□□□ -0.49
USB1-212ENST00000566082 KDRP35968 1356 aa12□□□□□ -0.49
USB1-212ENST00000566082 GOLGA6L10A6NI86 522 aa12□□□□□ -0.49
USB1-212ENST00000566082 ZBTB22O15209 634 aa12□□□□□ -0.49
USB1-212ENST00000566082 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
USB1-212ENST00000566082 ZNF496Q96IT1 587 aaPredicted RBP12□□□□□ -0.49
USB1-212ENST00000566082 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
USB1-212ENST00000566082 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 EYA2O00167 538 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 MCM3P25205 808 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 GTF2A1P52655 376 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 NLRP5P59047 1200 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 KRT28Q7Z3Y7 464 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 ZNF274Q96GC6 653 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 GJB4Q9NTQ9 266 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 ANGEL1Q9UNK9 670 aaKnown RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 EFCAB8A8MWE9 144 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 GPAA1O43292 621 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 ODF2Q5BJF6 829 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 FBXO18Q8NFZ0 1043 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 CTAGE1Q96RT6 745 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 VPS16Q9H269 839 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 GOLPH3LQ9H4A5 285 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 GPHNQ9NQX3 736 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 TRIM21P19474 475 aaKnown RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 USP8P40818 1118 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 CDR1P51861 262 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 DNAJC21Q5F1R6 531 aaKnown RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 GPR161Q8N6U8 529 aaKnown RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
USB1-212ENST00000566082 RIMBP3CA6NJZ7 1639 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 RIMBP3BA6NNM3 1639 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 RIMBP3Q9UFD9 1639 aa11.99□□□□□ -0.49
USB1-212ENST00000566082 SSBP05455 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
USB1-212ENST00000566082 MTIF2P46199 727 aaKnown RBP11.98□□□□□ -0.49
USB1-212ENST00000566082 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 TTF1Q15361 905 aaPredicted RBP11.98□□□□□ -0.49
USB1-212ENST00000566082 SARM1Q6SZW1 724 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 DIS3L2Q8IYB7 885 aaKnown RBP11.98□□□□□ -0.49
USB1-212ENST00000566082 STAMQ92783 540 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 CEP89Q96ST8 783 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 DSCC1Q9BVC3 393 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 FAM107BQ9H098 131 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 RABEP2Q9H5N1 569 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 TAF6LQ9Y6J9 622 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 ARHGEF40Q8TER5 1519 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 LTKP29376 864 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 RBM6P78332 1123 aaKnown RBP11.98□□□□□ -0.49
USB1-212ENST00000566082 IQCA1Q86XH1 822 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 MICALL1Q8N3F8 863 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 GDAP1L1Q96MZ0 367 aa11.98□□□□□ -0.49
USB1-212ENST00000566082 HAUS7Q99871 368 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms