RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 SMNDC1O75940 238 aaKnown RBP eCLIP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 BPNT1O95861 308 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 THBS1P07996 1170 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 IBSPP21815 317 aaPredicted RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 GARTP22102 1010 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 CRKP46108 304 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 VEGFBP49765 207 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 NRLP54845 237 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 PCBP4P57723 403 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 CTBSQ01459 385 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 PCDH1Q08174 1060 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 FAAP100Q0VG06 881 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 LBRQ14739 615 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 PCNX4Q63HM2 1172 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 EGFLAMQ63HQ2 1017 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 LARP1BQ659C4 914 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 VWA5B2Q8N398 1253 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 Q8N3U1 123 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 CCDC155Q8N6L0 562 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 GRIN3AQ8TCU5 1115 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 NANOS1Q8WY41 292 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 IRF7Q92985 503 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 DEPDC7Q96QD5 511 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 POP1Q99575 1024 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 PBX4Q9BYU1 374 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 MUC3BQ9H195 1237 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 MIR1-1HGQ9H1L0 117 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 BRMS1Q9HCU9 246 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 TMEM39AQ9NV64 488 aa2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 DNAJB12Q9NXW2 375 aaKnown RBP2.64□□□□□ -1.99
SUB1P4-201ENST00000566062 ARID1BQ8NFD5 2236 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 hCG_2014768A0A024R1R8 64 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 SLC35F4A4IF30 521 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 NFKBIEO00221 500 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 KLF4O43474 513 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 GRIN3BO60391 1043 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 DDAH1O94760 285 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 TRIM37O94972 964 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 KIF4AO95239 1232 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 MAP3K6O95382 1288 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 FGFR3P22607 806 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ITPKAP23677 461 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 SOX9P48436 509 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ZNF165P49910 485 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 IGBP1P78318 339 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 CLCQ05315 142 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 IFRD2Q12894 506 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 RAB33AQ14088 237 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 LRRC14Q15048 493 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ZNF423Q2M1K9 1284 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 CWF19L2Q2TBE0 894 aaKnown RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 RNF187Q5TA31 235 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 GDF6Q6KF10 455 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 FOXR1Q6PIV2 292 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ELMSAN1Q6PJG2 1045 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 AGMOQ6ZNB7 445 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 FAM196AQ6ZSG2 479 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 FAM35AQ86V20 835 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 TRIM22Q8IYM9 498 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 NLGN1Q8N2Q7 840 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 CELF2-AS1Q8N7Q2 184 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 TMEM102Q8N9M5 508 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 KCNB2Q92953 911 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 RHOVQ96L33 236 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 TRERF1Q96PN7 1200 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 DNAJC7Q99615 494 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 SMG9Q9H0W8 520 aaKnown RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ZNF576Q9H609 170 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 SH2B1Q9NRF2 756 aaPredicted RBP2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 SNTG2Q9NY99 539 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 ACTR10Q9NZ32 417 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 PRKAG3Q9UGI9 489 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 STRIP2Q9ULQ0 834 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 PHF24Q9UPV7 400 aa2.63□□□□□ -1.99
SUB1P4-201ENST00000566062 FAM86C2PA6NEL3 165 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 PPP1R12AO14974 1030 aaPredicted RBP2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 BMP4P12644 408 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 PTPRAP18433 802 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 BMP6P22004 513 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 NME2P22392 152 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 ARNTP27540 789 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 SOX18P35713 384 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 CABP4P57796 275 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 ANAPC15P60006 121 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 GPLD1P80108 840 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 GSTM4Q03013 218 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 KRTAP1-1Q07627 177 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 SERINC3Q13530 473 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 COL9A2Q14055 689 aaPredicted RBP2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 PTPROQ16827 1216 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 C21orf62-AS1Q17RA5 79 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 RPS26P11Q5JNZ5 115 aaPredicted RBP2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 RASIP1Q5U651 963 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 NBPF6Q5VWK0 638 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 MAP1SQ66K74 1059 aaPredicted RBP2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 KANK3Q6NY19 840 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 LLGL2Q6P1M3 1020 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 MPRIPQ6WCQ1 1025 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 RUFY4Q6ZNE9 571 aa2.62□□□□□ -1.99
SUB1P4-201ENST00000566062 FILIP1Q7Z7B0 1213 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms