RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 WHAMMP3Q1A5X7 153 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 AFAP1L1Q8TED9 768 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ZKSCAN4Q969J2 545 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 SLC24A3Q9HC58 644 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ETAA1Q9NY74 926 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 CDC23Q9UJX2 597 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TSPY2A6NKD2 308 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 MYO1BO43795 1136 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TSPY3P0CV98 308 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TSPY8P0CW00 308 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 FANCCQ00597 558 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TSPY1Q01534 308 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 CAMK4Q16566 473 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 UBE3BQ7Z3V4 1068 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 UNC5CLQ8IV45 518 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SNRKQ9NRH2 765 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SPATS2Q86XZ4 545 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 KAT14Q9H8E8 782 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 IFNKQ9P0W0 207 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 RPS6KL1Q9Y6S9 549 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ATXN2Q99700 1313 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 ARHGAP6O43182 974 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 FCHSD2O94868 740 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 FOXD4Q12950 439 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 HSP90AB2PQ58FF8 381 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ERCC4Q92889 916 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 SH3GL3Q99963 347 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ADGRF5Q8IZF2 1346 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 CTAGE5O15320 804 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SFPQP23246 707 aaKnown RBP eCLIP3.31□□□□□ -1.884e-6■■■□□ 18.1
CHD9-218ENST00000566029 CDR1P51861 262 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 AK2P54819 239 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NAA16Q6N069 864 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 OR8K1Q8NGG5 319 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SH3GL2Q99962 352 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 INTS13Q9NVM9 706 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 VSNL1P62760 191 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ACTN3Q08043 901 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 YTHDF3Q7Z739 585 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 SMARCC1Q92922 1105 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 ZSWIM6Q9HCJ5 1215 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NEDD4P46934 1319 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 MGRN1O60291 552 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NF2P35240 595 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 RAB27AP51159 221 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 WWC2Q6AWC2 1192 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 BRAPQ7Z569 592 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SNRNP27Q8WVK2 155 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 RUFY1Q96T51 708 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 BPIFA3Q9BQP9 254 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 HYPKQ9NX55 129 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TFIP11Q9UBB9 837 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 DDX20Q9UHI6 824 aaKnown RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 CYP46A1Q9Y6A2 500 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 HECW2Q9P2P5 1572 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 CDK12Q9NYV4 1490 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 TUBBP07437 444 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 PLCB4Q15147 1175 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 TWISTNBQ3B726 338 aaPredicted RBP3.31□□□□□ -1.88
CHD9-218ENST00000566029 C1QTNF12Q5T7M4 302 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 ARL10Q8N8L6 244 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NECAB1Q8N987 351 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHD9-218ENST00000566029 SPATA32Q96LK8 384 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 HPCAL4Q9UM19 191 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 LRRIQ1Q96JM4 1722 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 EVC2Q86UK5 1308 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NLRP12P59046 1061 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 PDIA5Q14554 519 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 CEP112Q8N8E3 955 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 NBPF3Q9H094 633 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 RTEL1Q9NZ71 1219 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 MADDQ8WXG6 1647 aa3.31□□□□□ -1.88
CHD9-218ENST00000566029 SCP2P22307 547 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MTA1Q13330 715 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 AP1ARQ63HQ0 302 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PRPHP41219 470 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 SLC12A5Q9H2X9 1139 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CD248Q9HCU0 757 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MBIPQ9NS73 344 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 GGA2Q9UJY4 613 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 G3V3G9 751 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PDCP20941 246 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PRKAR2BP31323 418 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CCT5P48643 541 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CASP8Q14790 479 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 DCAF8Q5TAQ9 597 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 TMC6Q7Z403 805 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 OTUD6BQ8N6M0 293 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 NUP133Q8WUM0 1156 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 MRPS27Q92552 414 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 ADGRG1Q9Y653 693 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 USP42Q9H9J4 1324 aaKnown RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 JCADQ9P266 1359 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CCDC160A6NGH7 325 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 ELL2O00472 640 aaPredicted RBP3.3□□□□□ -1.88
CHD9-218ENST00000566029 DTNBO60941 627 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 C6orf89Q6UWU4 347 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 PODNQ7Z5L7 613 aa3.3□□□□□ -1.88
CHD9-218ENST00000566029 CTCFLQ8NI51 663 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms