RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
SMPD3-206ENST00000566009 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
SMPD3-206ENST00000566009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMPD3-206ENST00000566009 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
SMPD3-206ENST00000566009 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
SMPD3-206ENST00000566009 FAM86C2PA6NEL3 165 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 MYO1BO43795 1136 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 COL6A1P12109 1028 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 NHLH1Q02575 133 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 PDE3AQ14432 1141 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
SMPD3-206ENST00000566009 LRP10Q7Z4F1 713 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 ERO1BQ86YB8 467 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 ZBTB38Q8NAP3 1195 aaPredicted RBP12□□□□□ -0.49
SMPD3-206ENST00000566009 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
SMPD3-206ENST00000566009 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
SMPD3-206ENST00000566009 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 PANK3Q9H999 370 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 SEC31BQ9NQW1 1179 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 XDHP47989 1333 aa12□□□□□ -0.49
SMPD3-206ENST00000566009 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
SMPD3-206ENST00000566009 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
SMPD3-206ENST00000566009 HMX1Q9NP08 348 aaPredicted RBP11.99□□□□□ -0.49
SMPD3-206ENST00000566009 MGAMO43451 1857 aa11.99□□□□□ -0.49
SMPD3-206ENST00000566009 AOX1Q06278 1338 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 SMIM22K7EJ46 135 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 AKNAD1Q5T1N1 836 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 COA1Q9GZY4 146 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
SMPD3-206ENST00000566009 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
SMPD3-206ENST00000566009 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
SMPD3-206ENST00000566009 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
SMPD3-206ENST00000566009 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
SMPD3-206ENST00000566009 PPIL2Q13356 520 aa11.97□□□□□ -0.49
SMPD3-206ENST00000566009 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
SMPD3-206ENST00000566009 MED23Q9ULK4 1368 aa11.96□□□□□ -0.49
SMPD3-206ENST00000566009 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 GTF2IP78347 998 aa11.96□□□□□ -0.49
SMPD3-206ENST00000566009 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 PDIA6Q15084 440 aa11.96□□□□□ -0.49
SMPD3-206ENST00000566009 CCDC85BQ15834 202 aaPredicted RBP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 TEPSINQ96N21 525 aa11.96□□□□□ -0.49
SMPD3-206ENST00000566009 GAS2L1Q99501 681 aaPredicted RBP11.96□□□□□ -0.49
SMPD3-206ENST00000566009 HMGCRP04035 888 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 CYP2C8P10632 490 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 TRIM32Q13049 653 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
SMPD3-206ENST00000566009 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
SMPD3-206ENST00000566009 ZNF576Q9H609 170 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 PRKAG2Q9UGJ0 569 aa11.95□□□□□ -0.5
SMPD3-206ENST00000566009 ANXA1P04083 346 aa11.94□□□□□ -0.5
SMPD3-206ENST00000566009 AIMP1Q12904 312 aaKnown RBP11.94□□□□□ -0.5
SMPD3-206ENST00000566009 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
SMPD3-206ENST00000566009 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
SMPD3-206ENST00000566009 TXNRD3Q86VQ6 643 aa11.94□□□□□ -0.5
SMPD3-206ENST00000566009 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMPD3-206ENST00000566009 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
SMPD3-206ENST00000566009 CXXC1Q9P0U4 656 aaPredicted RBP11.94□□□□□ -0.5
SMPD3-206ENST00000566009 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
SMPD3-206ENST00000566009 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
SMPD3-206ENST00000566009 DNAJB2P25686 324 aa11.93□□□□□ -0.5
SMPD3-206ENST00000566009 PRKAR2BP31323 418 aa11.93□□□□□ -0.5
SMPD3-206ENST00000566009 MOGSQ13724 837 aa11.93□□□□□ -0.5
SMPD3-206ENST00000566009 RIC3Q7Z5B4 369 aa11.93□□□□□ -0.5
SMPD3-206ENST00000566009 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
SMPD3-206ENST00000566009 F8W031 263 aaPredicted RBP11.92□□□□□ -0.5
SMPD3-206ENST00000566009 PPATQ06203 517 aa11.92□□□□□ -0.5
SMPD3-206ENST00000566009 COA7Q96BR5 231 aa11.92□□□□□ -0.5
SMPD3-206ENST00000566009 TMEM39BQ9GZU3 492 aa11.92□□□□□ -0.5
SMPD3-206ENST00000566009 PRR33A8MZF0 331 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 ST18O60284 1047 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 KCNQ1P51787 676 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 RBM5P52756 815 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMPD3-206ENST00000566009 TFF2Q03403 129 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
SMPD3-206ENST00000566009 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 BADQ92934 168 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 FBXL18Q96ME1 805 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 WRNIP1Q96S55 665 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
SMPD3-206ENST00000566009 ZNF70Q9UC06 446 aaPredicted RBP11.91□□□□□ -0.5
SMPD3-206ENST00000566009 KCNH4Q9UQ05 1017 aa11.91□□□□□ -0.5
SMPD3-206ENST00000566009 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 HTATSF1O43719 755 aaKnown RBP11.9□□□□□ -0.5
SMPD3-206ENST00000566009 EIF2S2P20042 333 aaKnown RBP11.9□□□□□ -0.5
SMPD3-206ENST00000566009 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
SMPD3-206ENST00000566009 ADGRE1Q14246 886 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 AAK1Q2M2I8 961 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
SMPD3-206ENST00000566009 RNPC3Q96LT9 517 aaKnown RBP11.9□□□□□ -0.5
SMPD3-206ENST00000566009 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms