RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CHURC1Q8WUH1 139 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 SEMA3EO15041 775 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 EZRP15311 586 aaKnown RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 PPP1R2P41236 205 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 CAMK4Q16566 473 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 ATL3Q6DD88 541 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 MSANTD4Q8NCY6 345 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 NUP88Q99567 741 aaPredicted RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 TDRD12Q587J7 1177 aaKnown RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 CREB3L3Q68CJ9 461 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 BRINP3Q76B58 766 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 TRMT1LQ7Z2T5 733 aaKnown RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 SMCR8Q8TEV9 937 aaPredicted RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 PPEF1O14829 653 aaPredicted RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 PLVAPQ9BX97 442 aa7.42□□□□□ -1.22
LINC01043-201ENST00000565936 TTF2Q9UNY4 1162 aaKnown RBP7.42□□□□□ -1.22
LINC01043-201ENST00000565936 PSMA7O14818 248 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 NEMFO60524 1076 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 TIMM10P62072 90 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 UBE2HP62256 183 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 XDHP47989 1333 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 NOP56O00567 594 aaKnown RBP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 DTHD1Q6ZMT9 781 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 MTERF4Q7Z6M4 381 aaKnown RBP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 CERKQ8TCT0 537 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 USP40Q9NVE5 1235 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 JAG2Q9Y219 1238 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 IGHDP01880 384 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 ZSCAN22P10073 491 aaPredicted RBP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 CTNNA2P26232 953 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 GTF2IP78347 998 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 MFSD14BQ5SR56 506 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 RRAGBQ5VZM2 374 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 CDAN1Q8IWY9 1227 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 TRIM47Q96LD4 638 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 ERVV-1B6SEH8 477 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 KIF5CO60282 957 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 MCM3P25205 808 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 SLC1A4P43007 532 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 FILIP1Q7Z7B0 1213 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 SUCLG2Q96I99 432 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 ALS2CR12Q96Q35 445 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 JCADQ9P266 1359 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 BICDL2A1A5D9 508 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 USP8P40818 1118 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 GSDMDP57764 484 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 CCDC93Q567U6 631 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 HAUS3Q68CZ6 603 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 G2E3Q7L622 706 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 KBTBD3Q8NAB2 608 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 TAOK3Q9H2K8 898 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 SYNCQ9H7C4 482 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 AATFQ9NY61 560 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 M0QZ92 97 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 UBE4AQ14139 1066 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 SUPT20HL1Q3ZLR7 823 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 RUFY3Q7L099 469 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 VSIG10Q8N0Z9 540 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 ZNF710Q8N1W2 664 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01043-201ENST00000565936 TRIM35Q9UPQ4 493 aa7.41□□□□□ -1.22
LINC01043-201ENST00000565936 AFF2P51816 1311 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 TAF5LO75529 589 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
LINC01043-201ENST00000565936 DEXIO95424 95 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 SERPINB2P05120 415 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 ARMT1Q9H993 441 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 PCDHB15Q9Y5E8 787 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 SPATA31A6Q5VVP1 1343 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 SMTNP53814 917 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 TAF12Q16514 161 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 HOOK3Q86VS8 718 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 TMX3Q96JJ7 454 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 ADGRL3Q9HAR2 1447 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 IGSF1Q8N6C5 1336 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 ASIC1P78348 528 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 DALRD3Q5D0E6 543 aaKnown RBP7.4□□□□□ -1.22
LINC01043-201ENST00000565936 DDX12PQ92771 950 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 AZI2Q9H6S1 392 aa7.4□□□□□ -1.22
LINC01043-201ENST00000565936 ERBB3P21860 1342 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 PPM1FP49593 454 aaPredicted RBP7.4□□□□□ -1.23
LINC01043-201ENST00000565936 SLC27A3Q5K4L6 730 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 SMC5Q8IY18 1101 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 CCDC112Q8NEF3 446 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 GPCPD1Q9NPB8 672 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.4□□□□□ -1.23
LINC01043-201ENST00000565936 OVOS2A0A0G2JMS6 1433 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 OVOS2A0A0J9YW53 1432 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 OVOS2Q6IE36 1432 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 GPAA1O43292 621 aa7.4□□□□□ -1.23
LINC01043-201ENST00000565936 PCP11498 1178 aaKnown RBP7.4□□□□□ -1.23
LINC01043-201ENST00000565936 RPL13P26373 211 aaKnown RBP7.4□□□□□ -1.23
LINC01043-201ENST00000565936 PAFAH1B1P43034 410 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms