RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 KIAA0825Q8IV33 1275 aa9.39□□□□□ -0.91
CDH1-208ENST00000565810 GPC2Q8N158 579 aa9.39□□□□□ -0.91
CDH1-208ENST00000565810 DPF2Q92785 391 aa9.39□□□□□ -0.91
CDH1-208ENST00000565810 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
CDH1-208ENST00000565810 MXD3Q9BW11 206 aa9.39□□□□□ -0.91
CDH1-208ENST00000565810 ZBTB12Q9Y330 459 aaPredicted RBP9.39□□□□□ -0.91
CDH1-208ENST00000565810 LTBP1Q14766 1721 aa9.39□□□□□ -0.91
CDH1-208ENST00000565810 BRCA1P38398 1863 aaKnown RBP9.38□□□□□ -0.91
CDH1-208ENST00000565810 RFX7Q2KHR2 1363 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 ZNF532Q9HCE3 1301 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 H7C1D1 291 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 BAG3O95817 575 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
CDH1-208ENST00000565810 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH1-208ENST00000565810 HDLBPQ00341 1268 aaKnown RBP9.38□□□□□ -0.91
CDH1-208ENST00000565810 MECOMQ03112 1051 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 CERS5Q8N5B7 392 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 APPBP2Q92624 585 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 TEKT1Q969V4 418 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 MRIQ9BWK5 157 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 HELLSQ9NRZ9 838 aa9.38□□□□□ -0.91
CDH1-208ENST00000565810 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
CDH1-208ENST00000565810 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 CACNA1SQ13698 1873 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 CHMLP26374 656 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 CRKP46108 304 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 GMPSP49915 693 aaPredicted RBP9.37□□□□□ -0.91
CDH1-208ENST00000565810 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CDH1-208ENST00000565810 GRIK5Q16478 980 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 MCMDC2Q4G0Z9 681 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 HHIPL2Q6UWX4 724 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 CWC27Q6UX04 472 aaKnown RBP9.37□□□□□ -0.91
CDH1-208ENST00000565810 CERS3Q8IU89 383 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
CDH1-208ENST00000565810 GMLQ99445 158 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
CDH1-208ENST00000565810 SERPINA10Q9UK55 444 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
CDH1-208ENST00000565810 MROH7-TTC4A0A0A0MT08 1334 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 DDNO94850 711 aaPredicted RBP9.36□□□□□ -0.91
CDH1-208ENST00000565810 PLCG2P16885 1265 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 SCNN1DP51172 638 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 NMIQ13287 307 aaPredicted RBP9.36□□□□□ -0.91
CDH1-208ENST00000565810 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 DIXDC1Q155Q3 683 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 CFAP100Q494V2 611 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 KIAA1211Q6ZU35 1233 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
CDH1-208ENST00000565810 RAD50Q92878 1312 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 TCRBV5S4A2TA0A5A2 114 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 MYO1BO43795 1136 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 BTDP43251 543 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 ZNF280AP59817 542 aaPredicted RBP9.35□□□□□ -0.91
CDH1-208ENST00000565810 PPP4CP60510 307 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 MIGA1Q8NAN2 632 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 ARAP2Q8WZ64 1704 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 OSBP2Q969R2 916 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 PUS7LQ9H0K6 701 aaKnown RBP9.35□□□□□ -0.91
CDH1-208ENST00000565810 MYOZ2Q9NPC6 264 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 AATFQ9NY61 560 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH1-208ENST00000565810 GPRC5DQ9NZD1 345 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 COL4A5P29400 1685 aa9.35□□□□□ -0.91
CDH1-208ENST00000565810 GAKO14976 1311 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 A0A0D9SFI3 127 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 GPAA1O43292 621 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 REC8O95072 547 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 MBD4O95243 580 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 CHGBP05060 677 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 GNAT2P19087 354 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 RBM26Q5T8P6 1007 aaKnown RBP9.34□□□□□ -0.91
CDH1-208ENST00000565810 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 SEC62Q99442 399 aaKnown RBP9.34□□□□□ -0.91
CDH1-208ENST00000565810 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 CRNKL1Q9BZJ0 848 aaKnown RBP9.34□□□□□ -0.91
CDH1-208ENST00000565810 ADARB2Q9NS39 739 aaKnown RBP9.34□□□□□ -0.91
CDH1-208ENST00000565810 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 TMOD2Q9NZR1 351 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 DAGLAQ9Y4D2 1042 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 A0A1B0GUL6 1792 aa9.34□□□□□ -0.91
CDH1-208ENST00000565810 M0R2C6 588 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 SGSM2O43147 1006 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 APPP05067 770 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 USP5P45974 858 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 DYNLL1P63167 89 aaKnown RBP9.33□□□□□ -0.92
CDH1-208ENST00000565810 KIF4BQ2VIQ3 1234 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 APOBEC3HQ6NTF7 200 aaKnown RBP9.33□□□□□ -0.92
CDH1-208ENST00000565810 ADGRA1Q86SQ6 560 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 TEX11Q8IYF3 940 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms