RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 FAM177BA6PVY3 158 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 TXNDC9O14530 226 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 F13A1P00488 732 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 CCT2P78371 535 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 BRD3Q15059 726 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 CCDC89Q8N998 374 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 TMX3Q96JJ7 454 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 CEP104O60308 925 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 FAM13AO94988 1023 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 TTC22Q5TAA0 569 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 PPP4R1Q8TF05 950 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 NUCKS1Q9H1E3 243 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 GAPVD1Q14C86 1478 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 LMOD1P29536 600 aaPredicted RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 INPP1P49441 399 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 NUCB1Q02818 461 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 SMIM23A6NLE4 172 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 OPHN1O60890 802 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 TMPOP42166 694 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 ASIC1P78348 528 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 ZSCAN26Q16670 478 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 RTEL1-TNFRSF6BF6WH68 1400 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 WDR46O15213 610 aaKnown RBP5.69□□□□□ -1.5
SMG1-211ENST00000565324 STX10O60499 249 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 PHBP35232 272 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 MED4Q9NPJ6 270 aa5.69□□□□□ -1.5
SMG1-211ENST00000565324 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMG1-211ENST00000565324 E7EVH7 732 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 KIF11P52732 1056 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CUL4BQ13620 913 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CCDC125Q86Z20 511 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 KLHL34Q8N239 644 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 KIFC2Q96AC6 838 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 SLC26A6Q9BXS9 759 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ARMC9Q7Z3E5 817 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 FCHSD1Q86WN1 690 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 KLHL14Q9P2G3 628 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ZBTB43O43298 467 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 WTAPQ15007 396 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CTTNBP2NLQ9P2B4 639 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CNPY2Q9Y2B0 182 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 C9orf84Q5VXU9 1444 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 HDAC1Q13547 482 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 MUM1L1Q5H9M0 696 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ISM2Q6H9L7 571 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ALG1Q9BT22 464 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ARHGAP6O43182 974 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 RNASELQ05823 741 aaKnown RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 ZKSCAN8Q15776 578 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 TMOD4Q9NZQ9 345 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ESRRGP62508 458 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 UAP1Q16222 522 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 NAA16Q6N069 864 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 CCDC117Q8IWD4 279 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 LZTFL1Q9NQ48 299 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 TMTC1Q8IUR5 882 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 IQUBQ8NA54 791 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 SEPT8Q92599 483 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 XAB2Q9HCS7 855 aaKnown RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 DACT1Q9NYF0 836 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 NSD3Q9BZ95 1437 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 UQCRFS1P1P0C7P4 283 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 AFMP43652 599 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 IFIT1BQ5T764 474 aaKnown RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 NBPF6Q5VWK0 638 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CNNM4Q6P4Q7 775 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 DACT3Q96B18 629 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 NBPF4Q96M43 638 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 RBSNQ9H1K0 784 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 IFNKQ9P0W0 207 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 SPECC1L-ADORA2AF8WAN1 911 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CALM1P0DP23 149 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CALM2P0DP24 149 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CALM3P0DP25 149 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 PNMA8AQ86V59 439 aaPredicted RBP5.68□□□□□ -1.5
SMG1-211ENST00000565324 EFCAB13Q8IY85 973 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 TSPY2A6NKD2 308 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 TMEM110-MUSTN1A8MSY1 372 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 SPOPO43791 374 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 SMIM24O75264 130 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ZPR1O75312 459 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 CCDC93Q567U6 631 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 TOM1L2Q6ZVM7 507 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 ESR2Q92731 530 aa5.68□□□□□ -1.5
SMG1-211ENST00000565324 TTC21BQ7Z4L5 1316 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 RBM26Q5T8P6 1007 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 SSH1Q8WYL5 1049 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 CDC5LQ99459 802 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 BOLA2Q9H3K6 86 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 BAIAP2L1Q9UHR4 511 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PTPN23Q9H3S7 1636 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 GOLGA8KD6RF30 607 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 JPH4Q96JJ6 628 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 PPP1R9AQ9ULJ8 1098 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.67□□□□□ -1.5
SMG1-211ENST00000565324 MCM7P33993 719 aa5.67□□□□□ -1.5
SMG1-211ENST00000565324 ARID5AQ03989 594 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms