RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 TMX3Q96JJ7 454 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 DBNDD1Q9H9R9 158 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 IQSEC3Q9UPP2 1182 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 PSME4Q14997 1843 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 RASSF7Q02833 373 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 CUL4AQ13619 759 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 LRRFIP1Q32MZ4 808 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 TBC1D22AQ8WUA7 517 aa15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-208ENST00000565070 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 ZAP70P43403 619 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
NSMCE1-208ENST00000565070 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 CLEC17AQ6ZS10 378 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 TTC14Q96N46 770 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 DOCK2Q92608 1830 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 GOLIM4O00461 696 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 CYP2E1P05181 493 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 NUCB2P80303 420 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 STRIP1Q5VSL9 837 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 MYH7P12883 1935 aa15.12■□□□□ 0.01
NSMCE1-208ENST00000565070 USP17L3A6NCW0 530 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 USP17L4A6NCW7 530 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 FKBP1AP62942 108 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 GTF2IP78347 998 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 GSE1Q14687 1217 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 TTLL5Q6EMB2 1281 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 USP17L1Q7RTZ2 530 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 ZNF589Q86UQ0 364 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 SCN9AQ15858 1988 aa15.11■□□□□ 0.01
NSMCE1-208ENST00000565070 DDX11L8A8MPP1 907 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 CREB3L3Q68CJ9 461 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 GBP4Q96PP9 640 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 SUGT1Q9Y2Z0 365 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 COL4A5P29400 1685 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 TNIP1Q15025 636 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 MFSD14BQ5SR56 506 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 LRP2BPQ9P2M1 347 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 MYO3BQ8WXR4 1341 aa15.1■□□□□ 0.01
NSMCE1-208ENST00000565070 YDJCA8MPS7 323 aa15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 EIF6P56537 245 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 MCMDC2Q4G0Z9 681 aa15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 MAST2Q6P0Q8 1798 aa15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 MYO5AQ9Y4I1 1855 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-208ENST00000565070 ZNF646O15015 1829 aaPredicted RBP15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 MAST3O60307 1309 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 SLC27A2O14975 620 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 CASTP20810 708 aaKnown RBP15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 ADCK5Q3MIX3 580 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 VPS53Q5VIR6 699 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 RNF20Q5VTR2 975 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 RNF181Q9P0P0 153 aa15.08■□□□□ 0.01
NSMCE1-208ENST00000565070 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
NSMCE1-208ENST00000565070 FZD9O00144 591 aa15.08■□□□□ 0
NSMCE1-208ENST00000565070 IDH1O75874 414 aaKnown RBP15.08■□□□□ 0
NSMCE1-208ENST00000565070 LDHBP07195 334 aaKnown RBP15.08■□□□□ 0
NSMCE1-208ENST00000565070 PRELPP51888 382 aa15.08■□□□□ 0
NSMCE1-208ENST00000565070 CIAPIN1Q6FI81 312 aa15.08■□□□□ 0
NSMCE1-208ENST00000565070 JAKMIP1Q96N16 626 aaKnown RBP15.08■□□□□ 0
NSMCE1-208ENST00000565070 PIH1D3Q9NQM4 214 aaKnown RBP15.08■□□□□ 0
NSMCE1-208ENST00000565070 HELLSQ9NRZ9 838 aa15.08■□□□□ 0
NSMCE1-208ENST00000565070 AK2P54819 239 aa15.07■□□□□ 0
NSMCE1-208ENST00000565070 DACT2Q5SW24 774 aa15.07■□□□□ 0
NSMCE1-208ENST00000565070 SEC62Q99442 399 aaKnown RBP15.07■□□□□ 0
NSMCE1-208ENST00000565070 RAI14Q9P0K7 980 aa15.07■□□□□ 0
NSMCE1-208ENST00000565070 VIL1P09327 827 aaKnown RBP15.06■□□□□ 0
NSMCE1-208ENST00000565070 GSTO1P78417 241 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 ZMYM1Q5SVZ6 1142 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 RUFY3Q7L099 469 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 DZIP1Q86YF9 867 aaKnown RBP15.06■□□□□ 0
NSMCE1-208ENST00000565070 SLF2Q8IX21 1173 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 LIMCH1Q9UPQ0 1083 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 JAG2Q9Y219 1238 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 CYP46A1Q9Y6A2 500 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 RAD17O75943 681 aa15.06■□□□□ 0
NSMCE1-208ENST00000565070 PTMSP20962 102 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms