RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
TCF4-220ENST00000563824 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
TCF4-220ENST00000563824 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
TCF4-220ENST00000563824 USP19O94966 1318 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 EXOC5O00471 708 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 GPR182O15218 404 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 LDHBP07195 334 aaKnown RBP8.03□□□□□ -1.12
TCF4-220ENST00000563824 SMPD1P17405 629 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 MZF1P28698 734 aaPredicted RBP8.03□□□□□ -1.12
TCF4-220ENST00000563824 TXLNAP40222 546 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 USP5P45974 858 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 EHHADHQ08426 723 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 HIF1AQ16665 826 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 PKDCCQ504Y2 493 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 INSM2Q96T92 566 aaPredicted RBP8.03□□□□□ -1.12
TCF4-220ENST00000563824 FAM129BQ96TA1 746 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 TOR4AQ9NXH8 423 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 CD2APQ9Y5K6 639 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
TCF4-220ENST00000563824 SPATA31E1Q6ZUB1 1445 aa8.03□□□□□ -1.12
TCF4-220ENST00000563824 POLR3AO14802 1390 aaPredicted RBP8.02□□□□□ -1.13
TCF4-220ENST00000563824 WNK3Q9BYP7 1800 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 GCP02774 474 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 VAMP1P23763 118 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 ITGAEP38570 1179 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 FAM26DQ5JW98 314 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 TREML1Q86YW5 311 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 NLGN2Q8NFZ4 835 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 FAM13BQ9NYF5 915 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 WWC3Q9ULE0 1092 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 WDR90Q96KV7 1748 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 PRR36Q9H6K5 1346 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
TCF4-220ENST00000563824 PDGFAP04085 211 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 TATP17735 454 aaPredicted RBP8.01□□□□□ -1.13
TCF4-220ENST00000563824 FSTL1Q12841 308 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 SAFB2Q14151 953 aaKnown RBP eCLIP8.01□□□□□ -1.13
TCF4-220ENST00000563824 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 TOM1L2Q6ZVM7 507 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 PTF1AQ7RTS3 328 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 HPS1Q92902 700 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 WDR17Q8IZU2 1322 aa8.01□□□□□ -1.13
TCF4-220ENST00000563824 GOLGB1Q14789 3259 aaKnown RBP8□□□□□ -1.13
TCF4-220ENST00000563824 CAPN5O15484 640 aaPredicted RBP8□□□□□ -1.13
TCF4-220ENST00000563824 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
TCF4-220ENST00000563824 RECKO95980 971 aa8□□□□□ -1.13
TCF4-220ENST00000563824 PHKA2P46019 1235 aa8□□□□□ -1.13
TCF4-220ENST00000563824 RNF144AP50876 292 aaPredicted RBP8□□□□□ -1.13
TCF4-220ENST00000563824 RGL3Q3MIN7 710 aa8□□□□□ -1.13
TCF4-220ENST00000563824 C8orf34Q49A92 452 aa8□□□□□ -1.13
TCF4-220ENST00000563824 BICDL1Q6ZP65 573 aa8□□□□□ -1.13
TCF4-220ENST00000563824 GJD3Q8N144 294 aa8□□□□□ -1.13
TCF4-220ENST00000563824 GPR152Q8TDT2 470 aa8□□□□□ -1.13
TCF4-220ENST00000563824 ZNF526Q8TF50 670 aaPredicted RBP8□□□□□ -1.13
TCF4-220ENST00000563824 ALKBH8Q96BT7 664 aaKnown RBP8□□□□□ -1.13
TCF4-220ENST00000563824 CARD10Q9BWT7 1032 aa8□□□□□ -1.13
TCF4-220ENST00000563824 NIF3L1Q9GZT8 377 aa8□□□□□ -1.13
TCF4-220ENST00000563824 IGSF5Q9NSI5 407 aa8□□□□□ -1.13
TCF4-220ENST00000563824 PNMA6FA0A0J9YX94 578 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 SPINT1O43278 529 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 BMP2P12643 396 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 DSC3Q14574 896 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 NUDT16Q96DE0 195 aaKnown RBP7.99□□□□□ -1.13
TCF4-220ENST00000563824 NEUROD4Q9HD90 331 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 TFCP2L1Q9NZI6 479 aa7.99□□□□□ -1.13
TCF4-220ENST00000563824 CCDC7Q96M83 1385 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
TCF4-220ENST00000563824 ZNF827Q17R98 1081 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 C6orf118Q5T5N4 469 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 DUSP9Q99956 384 aaKnown RBP7.98□□□□□ -1.13
TCF4-220ENST00000563824 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 PNPLA7Q6ZV29 1317 aa7.98□□□□□ -1.13
TCF4-220ENST00000563824 USP6P35125 1406 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 TNS2Q63HR2 1409 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 TRPM1Q7Z4N2 1603 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
TCF4-220ENST00000563824 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 HIRIP3Q9BW71 556 aaPredicted RBP7.97□□□□□ -1.13
TCF4-220ENST00000563824 PARP2Q9UGN5 583 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 ACEP12821 1306 aa7.97□□□□□ -1.13
TCF4-220ENST00000563824 BTAF1O14981 1849 aa7.96□□□□□ -1.13
TCF4-220ENST00000563824 KAT6BQ8WYB5 2073 aa7.96□□□□□ -1.13
TCF4-220ENST00000563824 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
TCF4-220ENST00000563824 MICAL2O94851 1124 aa7.96□□□□□ -1.14
TCF4-220ENST00000563824 NEFLP07196 543 aa7.96□□□□□ -1.14
TCF4-220ENST00000563824 PSMD2Q13200 908 aa7.96□□□□□ -1.14
TCF4-220ENST00000563824 ALG1LQ6GMV1 187 aa7.96□□□□□ -1.14
TCF4-220ENST00000563824 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
TCF4-220ENST00000563824 LYSMD3Q7Z3D4 306 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms