RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 SLC27A2O14975 620 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 PTMSP20962 102 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 ADD2P35612 726 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 PHKA1P46020 1223 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 NUCB2P80303 420 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 WASHC4Q2M389 1173 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 RUFY3Q7L099 469 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 FBXO33Q7Z6M2 555 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 LARGE2Q8N3Y3 721 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 HELBQ8NG08 1087 aaPredicted RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 IL25Q9H293 177 aa16.52■□□□□ 0.24
SMPD3-205ENST00000563455 SH2B1Q9NRF2 756 aaPredicted RBP16.52■□□□□ 0.24
SMPD3-205ENST00000563455 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
SMPD3-205ENST00000563455 SLX4Q8IY92 1834 aa16.52■□□□□ 0.23
SMPD3-205ENST00000563455 ARAP2Q8WZ64 1704 aa16.51■□□□□ 0.23
SMPD3-205ENST00000563455 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
SMPD3-205ENST00000563455 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
SMPD3-205ENST00000563455 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
SMPD3-205ENST00000563455 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
SMPD3-205ENST00000563455 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 TMEM88BA6NKF7 163 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 CUL4AQ13619 759 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 CERS3Q8IU89 383 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
SMPD3-205ENST00000563455 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
SMPD3-205ENST00000563455 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 DDIT3P35638 169 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 SCARF1Q14162 830 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 ALX1Q15699 326 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 TTC14Q96N46 770 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 PDRG1Q9NUG6 133 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
SMPD3-205ENST00000563455 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
SMPD3-205ENST00000563455 MAST3O60307 1309 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
SMPD3-205ENST00000563455 NT5C2P49902 561 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 BCAMP50895 628 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 ZNF804AQ7Z570 1209 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-205ENST00000563455 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
SMPD3-205ENST00000563455 ANKIB1Q9P2G1 1089 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 LRP2BPQ9P2M1 347 aa16.48■□□□□ 0.23
SMPD3-205ENST00000563455 POTEIP0CG38 1075 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 POTEJP0CG39 1038 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 PDE6AP16499 860 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 WDR66Q8TBY9 1149 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 OSBP2Q969R2 916 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 AIDAQ96BJ3 306 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 NEK1Q96PY6 1258 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
SMPD3-205ENST00000563455 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
SMPD3-205ENST00000563455 PASKQ96RG2 1323 aa16.46■□□□□ 0.23
SMPD3-205ENST00000563455 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
SMPD3-205ENST00000563455 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
SMPD3-205ENST00000563455 DPP8Q6V1X1 898 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 USP50Q70EL3 339 aaPredicted RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 MPNDQ8N594 471 aa16.46■□□□□ 0.23
SMPD3-205ENST00000563455 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
SMPD3-205ENST00000563455 NDUFB9Q9Y6M9 179 aa16.46■□□□□ 0.23
SMPD3-205ENST00000563455 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.22
SMPD3-205ENST00000563455 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 GPAA1O43292 621 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
SMPD3-205ENST00000563455 TNS4Q8IZW8 715 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 GBP4Q96PP9 640 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
SMPD3-205ENST00000563455 PIH1D3Q9NQM4 214 aaKnown RBP16.45■□□□□ 0.22
SMPD3-205ENST00000563455 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 ZNF532Q9HCE3 1301 aa16.45■□□□□ 0.22
SMPD3-205ENST00000563455 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
SMPD3-205ENST00000563455 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
SMPD3-205ENST00000563455 TNIP1Q15025 636 aa16.44■□□□□ 0.22
SMPD3-205ENST00000563455 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms