RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	PI4KAP1	Q8N8J0	262 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	FBXW7	Q969H0	707 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	PRMT6	Q96LA8	375 aa	Predicted RBP	10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	CHMP4A	Q9BY43	222 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	SPEF2	Q9C093	1822 aa		10.71	□□□□□ -0.69
CKLF-208	ENST00000563092	ELL2	O00472	640 aa	Predicted RBP	10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	ITGA6	P23229	1130 aa		10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	IGHMBP2	P38935	993 aa	Known RBP	10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	IREB2	P48200	963 aa	Known RBP	10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	CHRND	Q07001	517 aa		10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	CWF19L2	Q2TBE0	894 aa	Known RBP	10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	TEPSIN	Q96N21	525 aa		10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	OTOF	Q9HC10	1997 aa		10.7	□□□□□ -0.7
CKLF-208	ENST00000563092	CALD1	Q05682	793 aa	Known RBP	10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	GCKR	Q14397	625 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	RASA3	Q14644	834 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	CFAP100	Q494V2	611 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	UBE3B	Q7Z3V4	1068 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	TSPYL6	Q8N831	410 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	BRI3BP	Q8WY22	251 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	OPTN	Q96CV9	577 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092	PTCH2	Q9Y6C5	1203 aa		10.69	□□□□□ -0.7
CKLF-208	ENST00000563092		A0A1B0GUL6	1792 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	CLRN2	A0PK11	232 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092		H0YGN5	161 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	SNAP23	O00161	211 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	MYO1B	O43795	1136 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	NEXN	Q0ZGT2	675 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	WDR43	Q15061	677 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	NBPF11	Q86T75	865 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	PRO3102	Q9H379	93 aa		10.68	□□□□□ -0.7
CKLF-208	ENST00000563092	CEP290	O15078	2479 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	TRIOBP	Q9H2D6	2365 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	FAM205A	Q6ZU69	1335 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	APAF1	O14727	1248 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	PLCG2	P16885	1265 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	ARHGEF6	Q15052	776 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	SLC9C1	Q4G0N8	1177 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	UBE2Q1	Q7Z7E8	422 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	FAM43A	Q8N2R8	423 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	MPHOSPH8	Q99549	860 aa		10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	ZCCHC17	Q9NP64	241 aa	Known RBP	10.67	□□□□□ -0.7
CKLF-208	ENST00000563092	GNRH1	P01148	92 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	GTF2A2	P52657	109 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	FOXO4	P98177	505 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	TNFAIP1	Q13829	316 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	VGLL4	Q14135	290 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	G2E3	Q7L622	706 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	CDAN1	Q8IWY9	1227 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	SHISA4	Q96DD7	197 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	ELP3	Q9H9T3	547 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	VEZT	Q9HBM0	779 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	ZFYVE28	Q9HCC9	887 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	ZNF70	Q9UC06	446 aa	Predicted RBP	10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	SERPINA10	Q9UK55	444 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	LAMA3	Q16787	3333 aa		10.66	□□□□□ -0.7
CKLF-208	ENST00000563092	CCL15-CCL14	A0A0B4J2E2	113 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	SPDYE5	A6NIY4	337 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	TLR2	O60603	784 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	TAF5L	O75529	589 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	KCNJ4	P48050	445 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	MAP3K9	P80192	1104 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	LACTB	P83111	547 aa	Predicted RBP	10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	TAF1C	Q15572	869 aa	Predicted RBP	10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	CCL15	Q16663	113 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	ZNF804A	Q7Z570	1209 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	LINS1	Q8NG48	757 aa		10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	TDRD7	Q8NHU6	1098 aa	Known RBP	10.65	□□□□□ -0.7
CKLF-208	ENST00000563092	ARAP2	Q8WZ64	1704 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	COL6A3	P12111	3177 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	ANKRD18B	A2A2Z9	1011 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092		F8W031	263 aa	Predicted RBP	10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	PYGB	P11216	843 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	PRMT2	P55345	433 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	IRX5	P78411	483 aa	Predicted RBP	10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	SLC4A8	Q2Y0W8	1093 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	HELB	Q8NG08	1087 aa	Predicted RBP	10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	ARHGAP39	Q9C0H5	1083 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	FBXO3	Q9UK99	471 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092		A0A0C4DFX4	3053 aa		10.64	□□□□□ -0.71
CKLF-208	ENST00000563092	CTGF	P29279	349 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	DZIP1L	Q8IYY4	767 aa	Known RBP	10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	SLAIN1	Q8ND83	568 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	SH3TC2	Q8TF17	1288 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	STK31	Q9BXU1	1019 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	MYH16	Q9H6N6	1097 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	TDRD3	Q9H7E2	651 aa	Known RBP	10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	RBM27	Q9P2N5	1060 aa	Known RBP	10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	SNCAIP	Q9Y6H5	919 aa		10.63	□□□□□ -0.71
CKLF-208	ENST00000563092	ADGRA2	Q96PE1	1338 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	BTBD19	C9JJ37	291 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	CETP	P11597	493 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	FLII	Q13045	1269 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	IFIT5	Q13325	482 aa	Known RBP	10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	CCDC27	Q2M243	656 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	MFSD14B	Q5SR56	506 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	C17orf99	Q6UX52	265 aa		10.62	□□□□□ -0.71
CKLF-208	ENST00000563092	ERO1B	Q86YB8	467 aa		10.62	□□□□□ -0.71

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